Gene HMPREF0424_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0382 
SymbolpyrG 
ID8708762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp410319 
End bp412001 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content48% 
IMG OID646482498 
ProductCTP synthase 
Protein accessionYP_003373632 
Protein GI283782878 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAGAA GACAACATGG TAACTCTCAG GAGCATATTA CAAAGCATAT TTTTGTCACA 
GGTGGCGTAG TTTCGTCCCT CGGAAAAGGC CTTACAGCAT CATCTTTAGG TCGACTTTTA
CGCAGTCGCG GATTGCATGT ATTACAACAA AAACTTGACC CTTATATCAA TGTTGACCCG
GGTACAATGA ACCCATTCCA GCATGGCGAA GTCTATGTTA CGGAAGATGG TGCAGAAACA
GATCTCGATA TTGGTCATTA CGAGCGATTC CTCGATGTTT TCTTAAGCCA GAAAGCAAAT
GTTACAACTG GTCAGATTTA TCAATCTGTG CTTCGTAAGG AGCGCGCTGG CGAATATTTG
GGTCAGTGCG TGCAAGTTAT TCCGCATATT ACTGGCGAGA TTAAGTCGCG TATGCGCGCG
CAAGCTTCCG ACGATGTAGA CGTGATTATT ACGGAAATCG GCGGCACAGT TGGCGATATT
GAATCCCAGC CATTCTTGGA GGCTGCTCGC GAAGTTCGTC GCGATTTAGG TCCTGAAAAC
TGCATGTTTG TGCACGTTTC TTTGGTACCT TATATTGCTG CAGCGCACGA GTTGAAGACT
AAGCCAACTC AGCATTCTGT GATGATGCTG CGTCAGCTTG GTATTTCTCC AGACGCGCTT
GTTTTGCGCT CCGATCGTCC GCTTAATCAG GCTATTAAAG ACAAGATTTC GCTTATGTGT
GATGTCGATG CTGAAGGCGT TGTGAACTGC GTTGACGCTC CAAGCATTTA CGATGTGCCG
AAGATTTTGT TCAACGAGGG CTTGGACGCT TACGTTGTTC GCGAGCTTGA GCTTCCATTC
CACGATGTTG ATTGGAACGA GTGGGAAGAT TTGCTTGAGC GCGTGCATCA TCCAAAGCAT
GAGCTAAACA TTGCAATCGT TGGAAAGTAT ATTGATTTGC CGGATGCTTA CCTTTCTGTT
ACCGAGGCTA TTAAAGCTGG CGGTTTTGCA AACTGGGCTA AGGTGAATGT GCGCTGGGTT
GCTGCCGACA AGTGCGAAAC TCAAGAAGGT GCAGCTGCGG CTCTTGACCA AATGGACGGC
ATGGTTATTC CAGGCGGCTT CGGCATTCGC GGTATTGAAG GTAAGATTGG CGCACTTCGT
TACGCTCGCG AGCATGGTTT GCCAACGCTT GGTCTTTGCC TTGGCTTGCA ATCTATGGTT
ATTGAATACG CTCGTCACGT GCTTGGGCTT GAGGATGCTA ATTCCACTGA GTTCGAGAAG
GATTGTGGCG ATCCAGTAAT TGCGACTATG GAAGAGCAGA AGGATATCGT GGCTGGTAAG
GGAGATATGG GTCACACAAT GCGACTTGGC TCTTACCCTG CAATGCTTGA AGAAGGTTCT
ATTGTTGCTG AGCTTTACGG CACTACGCAT GTTACTGAGC GTCATCGTCA CCGTTACGAA
GTGAACGTGG CATATAAGGA TCGTTTGCGC GAAGCTGGCT TGCGTATTAG CGGCCAAAGC
CCAGATGGTA ATTTGACTGA GTTTGTGGAG CTTCCAAAGG AAGCTCACCC ATTCTACGTA
GCAACTCAAG CTCATCCAGA GTTTAAGTCT CGTCCAACTA AGCCTCATCC ACTGTTTGCT
GGATTGGTTG CGGCAGCACT GGAACATCAG GAAGCTGCTG CTAGTAGTAA GGCTGATAAG
TAA
 
Protein sequence
MVRRQHGNSQ EHITKHIFVT GGVVSSLGKG LTASSLGRLL RSRGLHVLQQ KLDPYINVDP 
GTMNPFQHGE VYVTEDGAET DLDIGHYERF LDVFLSQKAN VTTGQIYQSV LRKERAGEYL
GQCVQVIPHI TGEIKSRMRA QASDDVDVII TEIGGTVGDI ESQPFLEAAR EVRRDLGPEN
CMFVHVSLVP YIAAAHELKT KPTQHSVMML RQLGISPDAL VLRSDRPLNQ AIKDKISLMC
DVDAEGVVNC VDAPSIYDVP KILFNEGLDA YVVRELELPF HDVDWNEWED LLERVHHPKH
ELNIAIVGKY IDLPDAYLSV TEAIKAGGFA NWAKVNVRWV AADKCETQEG AAAALDQMDG
MVIPGGFGIR GIEGKIGALR YAREHGLPTL GLCLGLQSMV IEYARHVLGL EDANSTEFEK
DCGDPVIATM EEQKDIVAGK GDMGHTMRLG SYPAMLEEGS IVAELYGTTH VTERHRHRYE
VNVAYKDRLR EAGLRISGQS PDGNLTEFVE LPKEAHPFYV ATQAHPEFKS RPTKPHPLFA
GLVAAALEHQ EAAASSKADK