Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0382 |
Symbol | pyrG |
ID | 8708762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 410319 |
End bp | 412001 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646482498 |
Product | CTP synthase |
Protein accession | YP_003373632 |
Protein GI | 283782878 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
TIGRFAM ID | [TIGR00337] CTP synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTAGAA GACAACATGG TAACTCTCAG GAGCATATTA CAAAGCATAT TTTTGTCACA GGTGGCGTAG TTTCGTCCCT CGGAAAAGGC CTTACAGCAT CATCTTTAGG TCGACTTTTA CGCAGTCGCG GATTGCATGT ATTACAACAA AAACTTGACC CTTATATCAA TGTTGACCCG GGTACAATGA ACCCATTCCA GCATGGCGAA GTCTATGTTA CGGAAGATGG TGCAGAAACA GATCTCGATA TTGGTCATTA CGAGCGATTC CTCGATGTTT TCTTAAGCCA GAAAGCAAAT GTTACAACTG GTCAGATTTA TCAATCTGTG CTTCGTAAGG AGCGCGCTGG CGAATATTTG GGTCAGTGCG TGCAAGTTAT TCCGCATATT ACTGGCGAGA TTAAGTCGCG TATGCGCGCG CAAGCTTCCG ACGATGTAGA CGTGATTATT ACGGAAATCG GCGGCACAGT TGGCGATATT GAATCCCAGC CATTCTTGGA GGCTGCTCGC GAAGTTCGTC GCGATTTAGG TCCTGAAAAC TGCATGTTTG TGCACGTTTC TTTGGTACCT TATATTGCTG CAGCGCACGA GTTGAAGACT AAGCCAACTC AGCATTCTGT GATGATGCTG CGTCAGCTTG GTATTTCTCC AGACGCGCTT GTTTTGCGCT CCGATCGTCC GCTTAATCAG GCTATTAAAG ACAAGATTTC GCTTATGTGT GATGTCGATG CTGAAGGCGT TGTGAACTGC GTTGACGCTC CAAGCATTTA CGATGTGCCG AAGATTTTGT TCAACGAGGG CTTGGACGCT TACGTTGTTC GCGAGCTTGA GCTTCCATTC CACGATGTTG ATTGGAACGA GTGGGAAGAT TTGCTTGAGC GCGTGCATCA TCCAAAGCAT GAGCTAAACA TTGCAATCGT TGGAAAGTAT ATTGATTTGC CGGATGCTTA CCTTTCTGTT ACCGAGGCTA TTAAAGCTGG CGGTTTTGCA AACTGGGCTA AGGTGAATGT GCGCTGGGTT GCTGCCGACA AGTGCGAAAC TCAAGAAGGT GCAGCTGCGG CTCTTGACCA AATGGACGGC ATGGTTATTC CAGGCGGCTT CGGCATTCGC GGTATTGAAG GTAAGATTGG CGCACTTCGT TACGCTCGCG AGCATGGTTT GCCAACGCTT GGTCTTTGCC TTGGCTTGCA ATCTATGGTT ATTGAATACG CTCGTCACGT GCTTGGGCTT GAGGATGCTA ATTCCACTGA GTTCGAGAAG GATTGTGGCG ATCCAGTAAT TGCGACTATG GAAGAGCAGA AGGATATCGT GGCTGGTAAG GGAGATATGG GTCACACAAT GCGACTTGGC TCTTACCCTG CAATGCTTGA AGAAGGTTCT ATTGTTGCTG AGCTTTACGG CACTACGCAT GTTACTGAGC GTCATCGTCA CCGTTACGAA GTGAACGTGG CATATAAGGA TCGTTTGCGC GAAGCTGGCT TGCGTATTAG CGGCCAAAGC CCAGATGGTA ATTTGACTGA GTTTGTGGAG CTTCCAAAGG AAGCTCACCC ATTCTACGTA GCAACTCAAG CTCATCCAGA GTTTAAGTCT CGTCCAACTA AGCCTCATCC ACTGTTTGCT GGATTGGTTG CGGCAGCACT GGAACATCAG GAAGCTGCTG CTAGTAGTAA GGCTGATAAG TAA
|
Protein sequence | MVRRQHGNSQ EHITKHIFVT GGVVSSLGKG LTASSLGRLL RSRGLHVLQQ KLDPYINVDP GTMNPFQHGE VYVTEDGAET DLDIGHYERF LDVFLSQKAN VTTGQIYQSV LRKERAGEYL GQCVQVIPHI TGEIKSRMRA QASDDVDVII TEIGGTVGDI ESQPFLEAAR EVRRDLGPEN CMFVHVSLVP YIAAAHELKT KPTQHSVMML RQLGISPDAL VLRSDRPLNQ AIKDKISLMC DVDAEGVVNC VDAPSIYDVP KILFNEGLDA YVVRELELPF HDVDWNEWED LLERVHHPKH ELNIAIVGKY IDLPDAYLSV TEAIKAGGFA NWAKVNVRWV AADKCETQEG AAAALDQMDG MVIPGGFGIR GIEGKIGALR YAREHGLPTL GLCLGLQSMV IEYARHVLGL EDANSTEFEK DCGDPVIATM EEQKDIVAGK GDMGHTMRLG SYPAMLEEGS IVAELYGTTH VTERHRHRYE VNVAYKDRLR EAGLRISGQS PDGNLTEFVE LPKEAHPFYV ATQAHPEFKS RPTKPHPLFA GLVAAALEHQ EAAASSKADK
|
| |