Gene HMPREF0424_0381 details

Gene Information

• Locus tag: HMPREF0424_0381
• Symbol: aroQ
• ID: 8708797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gardnerella vaginalis 409-05
• Kingdom: Bacteria
• Replicon accession: NC_013721
• Strand: +
• Start bp: 409801
• End bp: 410256
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646482497
• Product: 3-dehydroquinate dehydratase, type II
• Protein accession: YP_003373631
• Protein GI: 283782877
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0757] 3-dehydroquinate dehydratase II
• TIGRFAM ID: [TIGR01088] 3-dehydroquinate dehydratase, type II

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAATC AGCATACAAA AAAAGTGCTT GTTGTAAGCG GACCGAATTT AGGTCGTTTA 
GGCGTGCGTC AGCCGGACGT GTACGGTAGC GAGAACTTTG AAACTTTGCG CGAGAAATGC 
GAAAAGTGGG GTGCGGAACT TGGGTTTGAA GTAGAAGTGC GCCAAAGTGA CGACGAAGCG 
CAAATGGTTC ACTGGATGCA CGAAGCTGCC GATACTCATA CGCCTGTTGT TATGAATCCT 
GCCGCTTTTA CACACTACAG TTACGCGCTC GCGGACGCTG CTCACATGGT TTTGGATGCT 
GGAGTTCCGC TCATGGAAGT GCATATTTCT AATCCTGCTG CGCGCGATGC TTTTCGTAAA 
ATTAGTGTAA TTAGTCCTGT TGCAACCGGC ACTATTACAG GCATGGGATT ATACGGCTAT 
AAGCTCGCTT TGGAAGCTGT TGCGCATCTT GTTTGA 

 

Protein sequence

MENQHTKKVL VVSGPNLGRL GVRQPDVYGS ENFETLREKC EKWGAELGFE VEVRQSDDEA 
QMVHWMHEAA DTHTPVVMNP AAFTHYSYAL ADAAHMVLDA GVPLMEVHIS NPAARDAFRK 
ISVISPVATG TITGMGLYGY KLALEAVAHL V