Gene HMPREF0424_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0371 
Symbol 
ID8709579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp400120 
End bp400794 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID646482487 
Productphosphoglycerate mutase family protein 
Protein accessionYP_003373621 
Protein GI283782867 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGC ATCTTTATTT AGTGCGTCAC GGACAGACGC TATTTAATCG CTATAATCGA 
CTGCAAGGCT GGTCAAATTC TCCACTTACT GAAAAAGGTT TGAAAGATGC GGACACGGCC 
GCAAAAAAGC TAGAAAATAT TGCTTTTGCT GCAGCTTACT GCTCGGATAC TACGCGTGCG 
CAAATCACAG CACAACGTAT TCTCGACGCA AATGAAGCTG CCGGTAACGC GCGCCCAAAG 
CTTGTAAGCG ATATGCATTT TCGTGAGCAA TGCTACGGCT ATTTTGAAGG TCAAGATATG 
CAAATGGCTT GGTGGGCTGC AGGAGCACCT CACGGAGCGC ACACTTATAA CGAAATCGTT 
GAAAAATTTG GGCTTGCAGC CACTCGTGAC ATGCTTAAAG AAGCGGATCC TTTCCACGAT 
GCCGAGTCAG ATATCGAATA TTGGACTCGC GTAGAAGAAG GTTTTGCGTT AATCGCTTCA 
AATTCTTTGC TTAACGATGG AGATAATGTT TTGCAAATTT CGCATGGCAA CACTTTGCTA 
AGTCTTATGC ACCGTTTTGC GCCTGCAGGC TACGATTTAA GCGAGCGCCC GGCAAACGGA 
AGCGTAACTA GGCTCGATTT TGACACTACT AAACCTATTG ATAACGCTAT TACTATTCAA 
GGCTACAATG AGTAG
 
Protein sequence
MLLHLYLVRH GQTLFNRYNR LQGWSNSPLT EKGLKDADTA AKKLENIAFA AAYCSDTTRA 
QITAQRILDA NEAAGNARPK LVSDMHFREQ CYGYFEGQDM QMAWWAAGAP HGAHTYNEIV 
EKFGLAATRD MLKEADPFHD AESDIEYWTR VEEGFALIAS NSLLNDGDNV LQISHGNTLL 
SLMHRFAPAG YDLSERPANG SVTRLDFDTT KPIDNAITIQ GYNE