| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0355 |
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| Symbol | |
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| ID | 8708754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 383828 |
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| End bp | 384814 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482471 |
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| Product | G5 domain protein |
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| Protein accession | YP_003373606 |
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| Protein GI | 283782852 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3583] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTC ACCGTAAGCA TACTGTTACG CTTGGTTCAC TCAGTTTACG ACAGTGGGCT
AGAGTTAGTG CGGTTATTTT GGGCTTCGTT GCTTTGGTGA TACTTGGTTT TACCTCGCGA
GATTTTTACG CTTCGTCTAA AGGTCACGCT GTTCAGGTTA CTTCTTATTC GGCAACCGAT
TCTTCGCAAG TTTCTCGTAG TGCTAGCCGT AGTATGTTAC ATAATGGTGC GACTTCATAT
ATTAACGTTG TTATAAATGG TCATCATCGT ACTATTTTGG GCACTAATTT CACTGATGTA
AAATCCGTTC TTGATGCTGG AGATATCACT CTTGAGCCAC ACGATGTTGT TACTCCATCT
CTTACAACTA AAGTCAGCGA ATCAACTGTT ATTACGATTA ATCGCGCAGG CGCAAAATTA
GAAAATTCCG ACGACCCAAT CGCGTTTAAC GTCGTCAAAA AGGAAACTGC TGCACTTCCA
AAAGGTACTG AGAAGGTGCA AAGTGAAGGC GCTAACGGCG TAATGGAAAC AGCAAAAATA
GTTACTCGAA CTAAGGGAAA AATAGTTTCC TCTAATATTT TTGCTTCTTA TGTTAAAAAA
GCTCCAAAAG ATAAGGTTAT TCTTGTTGGA ACTGGCGGCT CTTCTGCCGC AATTGGCTTA
GCTGCTTCTA TCGGTACGAC TGTTCCTGCT GGCGAGATGC AACAATGGGC TCACGACTGG
CTTATCTCTA ACGGTTATAG TGAAGCTGAT TTTACTGCAA CAGTATTTAT TATTTCTCAT
GAGTCCGGTT GGCGCGTAAA CGCAATGAAT CCTTCTGGGG CCTACGGTTT ACCTCAAGCT
TTGCCAGGCG GAAAAATGGC TTCTGCTGGC GCTGATTGGG CAACTAACTA TCAAACGCAG
CTCCGCTGGT TCTGGAATTA TTGCAATGGT CGTTATGGCT CCATTCAAGG CGCTTACAAT
CATTGGCTTT CCTACCACAG CTACTGA
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| Protein sequence | MTSHRKHTVT LGSLSLRQWA RVSAVILGFV ALVILGFTSR DFYASSKGHA VQVTSYSATD
SSQVSRSASR SMLHNGATSY INVVINGHHR TILGTNFTDV KSVLDAGDIT LEPHDVVTPS
LTTKVSESTV ITINRAGAKL ENSDDPIAFN VVKKETAALP KGTEKVQSEG ANGVMETAKI
VTRTKGKIVS SNIFASYVKK APKDKVILVG TGGSSAAIGL AASIGTTVPA GEMQQWAHDW
LISNGYSEAD FTATVFIISH ESGWRVNAMN PSGAYGLPQA LPGGKMASAG ADWATNYQTQ
LRWFWNYCNG RYGSIQGAYN HWLSYHSY
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