| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0330 |
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| Symbol | |
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| ID | 8709196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 359229 |
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| End bp | 360566 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482447 |
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| Product | putative nicotinate phosphoribosyltransferase |
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| Protein accession | YP_003373584 |
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| Protein GI | 283782830 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA TTTCATCTGC TCTTATGACG GACATGTATG AATACACTAT GCTCGACGCT
GCTCTTAAAG ACGGCACTGC AAATCGCAAG TGCGTTTTTG AAATTTTTAC GCGCCACTTG
CCTCAAGGTC GTCGTTACGG AGTTGTTGCT GGCATGGGCC GCATTTTGGA AGAGCTGCAA
AAATTCCATC TTTCGGAAGA TGATTTGTGT TTCTTAAGTG ATCGTAAAAT TGTTAGCGCA
GAAACCATTG AATGGCTGGA AAATTTCCGA TTCCACGGTA AAATTTCCGG TTATCGCGAG
GGGGAGATGT TCTTCCCGAA TTCGCCAATT TTGCAGGTAG AAGGCACTTT TGGTGAGTGC
ACTTTGCTTG AAACTGTGCT TCTTTCTGTG CTTAATTACG ATTGCGCGGT TGCCTCTGCC
GCAGCACGTA TGGTTTCAGC CTCCGCAGGT CGTCCTTGCA TGGATATGGG CGGCCGTCGC
ACAAACGAAT ATTCTGCAGT TGCTGCATCT CGCGCAGCGG TTATTGGCGG TTTTAAAGGT
ACTGCAAATC TGTTGGCTGC AAAACTTTAC GGATTGAAGG CAATCGGAAC CGCAGCTCAC
TGCTTCACTC TTGTTCACGA CACCGAGCGT GACGCTTTCA CTTCTCAAAT TGCAGCTCTT
GGCAAAGGCA CTACGCTTCT TGTTGACACT TATAATATTG AGGAAGCTGT AAAGACAGCC
GTGGAAGTTG CAGGTCCAGA TCTTGGCGGA ATTCGTATTG ATTCTGGAGA TTTGTGCGCT
CTGGCTCGTC GCGTTAGGAA TCAGCTCGAC GAGTTGGGTG CTAAAAACAC AAAGATTACA
GTTACTAACG ATTTGGACGA GTATGCTCTT GCTTCCTTAC AAAATGCGCC TGTGGATTCT
TACGGCATCG GCACAATGCT TGTAACCGGC TCCGGTGCTC CAACTTGTGC AATGGTTTAT
AAGCTTACTG AGCGTGAGGG TGCAGATGGT GTAATGCAGC CTGTTGCTAA GCGTTCTAAG
AATAAAGCGA CTGTGCCTGG ACGTAAGTTG GCGTATCGTT CATACGATTA CAGCAACGAT
TCTTGCGGTG TAGCTGATTG CGAACGCGTG ATTTCCGGTT CGGAAGTTGC GCTCGCTCAG
TTTAAGCCTA AGGATTCGTG GGAAAATCTG CTAGTTGATT ACATGGTCGA TGGTGAAGCT
GACGAACAGT TTATGGGTCA CGATGCGATT ATACGTGCCC AGGATTATTG CGCTTCTGCT
TTGCGTCGAC TGCCTTTGGC TGCGCAAAGT TTGATGCGCG GAGACCCTGC AATACCAACA
GAAATTCAAG TACTATAA
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| Protein sequence | MAEISSALMT DMYEYTMLDA ALKDGTANRK CVFEIFTRHL PQGRRYGVVA GMGRILEELQ
KFHLSEDDLC FLSDRKIVSA ETIEWLENFR FHGKISGYRE GEMFFPNSPI LQVEGTFGEC
TLLETVLLSV LNYDCAVASA AARMVSASAG RPCMDMGGRR TNEYSAVAAS RAAVIGGFKG
TANLLAAKLY GLKAIGTAAH CFTLVHDTER DAFTSQIAAL GKGTTLLVDT YNIEEAVKTA
VEVAGPDLGG IRIDSGDLCA LARRVRNQLD ELGAKNTKIT VTNDLDEYAL ASLQNAPVDS
YGIGTMLVTG SGAPTCAMVY KLTEREGADG VMQPVAKRSK NKATVPGRKL AYRSYDYSND
SCGVADCERV ISGSEVALAQ FKPKDSWENL LVDYMVDGEA DEQFMGHDAI IRAQDYCASA
LRRLPLAAQS LMRGDPAIPT EIQVL
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