| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0321 |
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| Symbol | |
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| ID | 8709378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 350485 |
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| End bp | 351069 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646482438 |
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| Product | RNA methyltransferase, RsmD family |
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| Protein accession | YP_003373575 |
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| Protein GI | 283782821 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0742] N6-adenine-specific methylase |
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| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.657175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATTA TTGCTGGACG TTTTAAATCT TTGCCGCTTA CTTCAGCGCA GTCGTGTACA
AGACCTACTA CAGATCGCAC GAAAGAAGCG ATATTTTCTA GGCTCGATTC GTGGGATGTT
ATGCACAATG CTCGCGTTCT TGATTTATTC GCCGGCACAG GTGCGTTAGG AGTTGAGGCG
CTATCTCGTG GCGCGCGTGA GCTTGTTTCT GTTGAAGCAA ATTCGCAAGC GGCTGCGCTG
ATACTTCGTA CGTCGAAAGC GTTGCAGAGT TCAAAGGTTT GGGATTCTGC GCTTTCTATG
AGGGTTCTTC GAAAGCGCGC GGAGCAGTTC GTTGCGGATT ATAGTGGGGA AGCGTTTGAC
TTGATTTTTA TTGATCCGCC TTATGCTTAC GAAACTGCGG ATTGCGAAAG TTTATTGACT
TCGATGATTG CGAGCGGAGT TGCGAGCGTT TCTGCGGATA CGTTGATTGT GTTGGAGCGT
AGCGCGCGAA GTGTTTTGCC GACTATGCCT GAGGGCTGGG AGCTGTTTGA TACGCGTAAT
TACGGAGAAA CTTCCGTGCT GTTCATTCAG CCTAAGCGCG ATTGA
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| Protein sequence | MHIIAGRFKS LPLTSAQSCT RPTTDRTKEA IFSRLDSWDV MHNARVLDLF AGTGALGVEA
LSRGARELVS VEANSQAAAL ILRTSKALQS SKVWDSALSM RVLRKRAEQF VADYSGEAFD
LIFIDPPYAY ETADCESLLT SMIASGVASV SADTLIVLER SARSVLPTMP EGWELFDTRN
YGETSVLFIQ PKRD
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