| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0310 |
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| Symbol | rpsR |
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| ID | 8709283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 337362 |
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| End bp | 337610 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646482427 |
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| Product | ribosomal protein S18 |
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| Protein accession | YP_003373564 |
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| Protein GI | 283782810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0899357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACGCA AAAGGCCGCA ACCACCGGTC AAGCCTTTCA AGAAGAAGCC AAATCCTTTG
AAGGCTGCCA AGATTACTGA AATTGATTAT AAAGACGTTG CTTTGCTGCG CAAGTTCGTT
TCTGACCGCG GCAAGATTCG TTCCCGTCGT ATCACCGGCG TAACCGTGCA GGAACAGCGC
AAGATCGCGA AGGCAGTGAA GAATGCTCGC GAAATGGCTT TGCTTCCTTA CGCCACTACC
GGTCGCTGA
|
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| Protein sequence | MSRKRPQPPV KPFKKKPNPL KAAKITEIDY KDVALLRKFV SDRGKIRSRR ITGVTVQEQR
KIAKAVKNAR EMALLPYATT GR
|
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