| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0301 |
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| Symbol | |
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| ID | 8709436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 325047 |
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| End bp | 326519 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482419 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373556 |
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| Protein GI | 283782802 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.362818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTAACT CACTTAACAA AGATGAACGC GCCGAAGAAC TTTTGCTTTC TGCGCGTTCT
AATCTTGAGT GTGTGCAAAG TCCACAATCT ACTCCGAAGT TAGCTGCGTC TAGACGAATT
AGCAGCGCGC CAATTCCTGT GCATGTTACT GCAACATTGT TTGACACTCC GTCTAAAGCT
GAGTGTATTG ACAATAAGCC ATTGCTTGTG CGTTTTGGTC GCAGGCTCGT TACGTCTATT
GTCGGCATGT GGATGCGTCT TGCTGGTCGT GTTGCTCGTC GTCTTGGCTG GTTTCCAAGT
GTTGAGCCAT ATATTGGGTA TGGAACGCAT AGATATGCTC GCTTGATTTG CAGAACTGTG
TATGCTCCAA AGCTTGGTCA TCATTCTGCT CTAAAACGCG GAATTTACGC GATGCTTGTT
GTTCCTGCTG TGCGTGTGCG CGTGGCTTTG TCTATTGACG GTATTCCTGT AGAAACAGCT
CAAATTGGCG ATTCTGAAAT ATACGATAAG CCTGAAGGTT CGCGCGATGG TAGTGCAGAG
TATTGTATTT CTGACCGTGC AGGGTATTTA GATTTAATTA CTGAGCGCGC TTTAGAGCCT
GGTCGTCACG TTGTTTCGTA TTCTGTTAGT GACCGTGAGC CTGTAAAAGC GAGCTTGTTT
GCTATTGACG CAAATGTTCC TGTTGGTGTT ATTTCGGACG TTGACGACAC TATTATGGTA
ACTCAAGCGC CTTCGCCAAT TCGTGCTGCT TATAACTTGC TTATTATGAA TCCTGCTCAT
CGTTCGCCAG TTACTGGAAT GTCTGAGTTT TTCCAGTCTT TAGAGCGTTT ACGTGACGAT
ATTCCATTTT TCTATCTTTC TACTTCTCCG TGGAATGTTG AGGCTTCAAT TCGTCACTTT
ATTGATCGCG AAAAGTTTCC TGAGGGTCCT CTTCTTCTTC GTGATTTGGA TCCACGTCCT
AAAACTTTTA TTCCAAACGG ACCGCAGCAT AAATTAGAAT TTGCAACTCA GCTTATGGAT
GATTTTCCGG GTATGCGTTT TGTGCTTATT GGCGATGATG GTCAAAAGGA TCCTTTAACG
TATGCGAATA TTATTCGTAA GCATCCAGGT CGTGTGCTTG CAGTAGGTAT TAGGCAATTG
CGTAAGCGTG CTACTGTTGA GGATTTTCGT CGTAAATTAT CTCGTGATTT TGCGGTTGCT
TTAAGTGCAT CTAAGCGTGC GTATGTTTTT TCGGATGCTC TTGATACTAC GTGTGAAGCT
GCGCAAGAAA TTCCTACTAT GGCGATCGAA AAATTACATA ATGCCAATGA GTTTTCTGGT
GATATTGATG ATTTTGATGA TGCTCAAATG CGCATAATTG AAGCAGAAGG TGCTGTTGGT
ACTTTGCAAG GCGTGCCATT TTTTGCAGCT CCTCAAGGCA AAGATTTAGC CAAAGTAATG
CTTCCGTTTA TAGAGGAAGC GATTGCGAAA TAG
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| Protein sequence | MGNSLNKDER AEELLLSARS NLECVQSPQS TPKLAASRRI SSAPIPVHVT ATLFDTPSKA
ECIDNKPLLV RFGRRLVTSI VGMWMRLAGR VARRLGWFPS VEPYIGYGTH RYARLICRTV
YAPKLGHHSA LKRGIYAMLV VPAVRVRVAL SIDGIPVETA QIGDSEIYDK PEGSRDGSAE
YCISDRAGYL DLITERALEP GRHVVSYSVS DREPVKASLF AIDANVPVGV ISDVDDTIMV
TQAPSPIRAA YNLLIMNPAH RSPVTGMSEF FQSLERLRDD IPFFYLSTSP WNVEASIRHF
IDREKFPEGP LLLRDLDPRP KTFIPNGPQH KLEFATQLMD DFPGMRFVLI GDDGQKDPLT
YANIIRKHPG RVLAVGIRQL RKRATVEDFR RKLSRDFAVA LSASKRAYVF SDALDTTCEA
AQEIPTMAIE KLHNANEFSG DIDDFDDAQM RIIEAEGAVG TLQGVPFFAA PQGKDLAKVM
LPFIEEAIAK
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