| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0299 |
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| Symbol | |
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| ID | 8709270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 321715 |
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| End bp | 322830 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482417 |
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| Product | diacylglycerol kinase catalytic domain (presumed) |
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| Protein accession | YP_003373554 |
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| Protein GI | 283782800 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.802768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTC AAGCGACTAT TGCTCTTATG ATGATTGTAT TCGCGCTTGT ACTCGCTCCA
TTCGTCATCA TGATTGTTAC GCGCGCCATG AAACGGCATC ATTTAGCGAA AAAACTCGCA
AAACGACACG GCGACTCTGT ACATTACGCG TTTATTCTAA ATCCTTCAAA GCCGCAGGCA
GAATCTTACC GCGAAAGTAT TCAAAATTAT TGCGACAAGC GCAAACTAAC TTACGAAATA
ATAGACACTC AGTTAGATAA AGACGGACGT GAATGCGCAC AAGAAGCACT TTCCAACGGA
GCGAACGTTG TTGTGGCAGT TGGCGGAGAC GGCACAGTTA GAACAGTTGC GAGCGCAGTA
AGCGGCAAAG GACACGCTAT GGGAATTATT CCTATTGGCA CCGGAAATCT TTTTGCAAGA
AACATGGGCA TACCTGTAAA CGATGTGGAA GCTGCATTGC GCGTGGCTAC TTCGCATGGA
TCTAGGCAGG TTGATGTTGG GCGAGTAACG ATTCTGGACA ATCCGAAAGA GGACCACGGC
CATGCGTTTT TGATTATTGC CGGAATTGGC TTTGATGCGC TTATGATTGA CGACACAGAC
CCGAAGCTAA AGAAAAACAT TAGTTGGCTT GCTTATTTTG TGGCCGGAGT TAAACATTTG
TTTATGCCGA AGTATCGTGC AACCGTTACC TTACAAAGAT CAAACGGCGA CGAAAGCGTA
CTAAAAGGAC TCACCTTCCG AACCCTTATG GCAGGAAACT GCGGGCAAAT TCCTATGTTC
TCGCTAATGC CAGAAGCCGC TTACGACGAC GGCGTGCTCG ACTTTGAAAT TATTGACACT
TCGGGCGGAT TAATCGGCTG GGCTAATTTA TTCCGCGGAG TAGTACACCA AACCGTAACC
GGTCACGCTC TGCAGCAGGA GTCGCTATCC GCAGGCTCCA GAATTGACCA AACGCAAGGA
TTTAGCGCGG AAGTGCAGTT GGAAAAAGCG GCGCCAGTGC AGGCGGACGG CGACATTTTG
GGTTACACAA AGCATTTGCG CTTCACTGTT GACAAACAAG CCCTGTGCGT GCGCGTGCCA
GCAAGCGTAA AAACCAGCGT TACTGTGAGT GAATAA
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| Protein sequence | MPIQATIALM MIVFALVLAP FVIMIVTRAM KRHHLAKKLA KRHGDSVHYA FILNPSKPQA
ESYRESIQNY CDKRKLTYEI IDTQLDKDGR ECAQEALSNG ANVVVAVGGD GTVRTVASAV
SGKGHAMGII PIGTGNLFAR NMGIPVNDVE AALRVATSHG SRQVDVGRVT ILDNPKEDHG
HAFLIIAGIG FDALMIDDTD PKLKKNISWL AYFVAGVKHL FMPKYRATVT LQRSNGDESV
LKGLTFRTLM AGNCGQIPMF SLMPEAAYDD GVLDFEIIDT SGGLIGWANL FRGVVHQTVT
GHALQQESLS AGSRIDQTQG FSAEVQLEKA APVQADGDIL GYTKHLRFTV DKQALCVRVP
ASVKTSVTVS E
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