| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0297 |
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| Symbol | rnhA |
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| ID | 8709392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 318885 |
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| End bp | 319970 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482415 |
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| Product | ribonuclease HI |
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| Protein accession | YP_003373552 |
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| Protein GI | 283782798 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCTGGT TGCAATCTGC AGCCGGCGCA TTTTTGAAAG GTTTTGTCAT GATTGTTGTT
TCAACAGACG GTTCCGCGCT CGGAAACCCA AATGGTTCAA TGGGTTGGGC GTGGGCAGAT
CACATTGACG AGTCTGGTAG CTCTAACGAA CATCATCACA CAGGCAATGC AGATGCTGGA
GGCGCAACTA ATGGCACAAA TCAAATTGGC GAATTATGCG CGGTTTTGGA AGCTTTACGA
GCACATCCTG GAAGAGAGCC GCTCACAATC GAAAGTGATT CACAATACGC TATAAACTGC
GCAACTACGT GGATTCACGG ATGGAAAAAG AACGGTTGGA AAAACTCTAA AAATGAACCT
GTTAAAAATG CCGAGCTGAT TCGAGCAATC GACGCGGAAA TTACTAAGCG CGAAGGCGCC
GTAAAATTCG TGTGGGTTAA GGGTCACGCA GGAAACGAAG GAAACGAAAA AGTTGATACA
TTAGCGCGCG GATATGCGGA AGATTGCCGA AATGGTTTGA AGGACGGATA CTTGCCTTTA
GAAGGCTGGA AGTCGCTTCT TGCTTCTGAA TATGCAAAAG GTACGAATGT GCCAAGTGAT
GCGAAAATGC TTTTAGATGG CAAAATTTCT CATGCAAAAT ACCATCTTGA ACGCACAGTT
GGCGAAGATA TTAATCCTGA TTTTTCTGCA CAAAATAGTA AAAACACTAG TGATCTAACT
GAATCTGCAA ATGAATCAGC GCGCGAACAA GCGCGTGAAA CAAAGCGTGA AACGTTAGAA
AATAGCGAAA AAGATGCACT ATCAATAGAA AATGAACAAG ATGCACACCA GCAAGACGCA
CACCAGCAAG ACGCTATAAC TATTGTTCAA GAAGTTCCAA AAACAAAGCA AAATGTTACG
CAAACTGCAT CTAAACCAGT TCAAGGATTA AGTGTTTCTG GCGTGCTGCA ATTTACTCCA
CCACCAAACA CAAGCCCAAG TTTTAACGGC GAAGCGCGCT TTATTTCCGG CACAATCAAC
GTAAACGGCT ACGTAGAACC AGACGGCACC TTGCATTTAT CTCCAACCGC CTTCTACCTT
TCATAG
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| Protein sequence | MRWLQSAAGA FLKGFVMIVV STDGSALGNP NGSMGWAWAD HIDESGSSNE HHHTGNADAG
GATNGTNQIG ELCAVLEALR AHPGREPLTI ESDSQYAINC ATTWIHGWKK NGWKNSKNEP
VKNAELIRAI DAEITKREGA VKFVWVKGHA GNEGNEKVDT LARGYAEDCR NGLKDGYLPL
EGWKSLLASE YAKGTNVPSD AKMLLDGKIS HAKYHLERTV GEDINPDFSA QNSKNTSDLT
ESANESAREQ ARETKRETLE NSEKDALSIE NEQDAHQQDA HQQDAITIVQ EVPKTKQNVT
QTASKPVQGL SVSGVLQFTP PPNTSPSFNG EARFISGTIN VNGYVEPDGT LHLSPTAFYL
S
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