| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0264 |
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| Symbol | |
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| ID | 8709277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 289525 |
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| End bp | 290097 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646482383 |
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| Product | ribosomal L5P C-terminal domain protein |
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| Protein accession | YP_003373521 |
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| Protein GI | 283782767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA CCGCTCTGAA AAACAAGGCG GCCGCCAAGC CGAAGTTCAA GGTACGCGCT
TATACGCGTT GCCAGGTTTG TGGTCGTCCT CACTCCGTGT ATCGCAAGTT CGGTCTGTGC
CGCATCTGCC TTCGTGAGAA GGCTCATCGC GGTGAGTTGC CGGGTGTTAC GAAGTCCAGT
TGGTAA
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| Protein sequence | MTDTTVELPA TPRLKQQYKD EIVPALEKEF GHTNPMQVAR VQKVVVSMGV GAAARDSKLI
EGAIKDLTLI AGQKPKVTKA KKSVAQFHLR EGQAIGAYVT LRGDRMWEFL DRLLTLALPR
IRDFRGINGN QFDGQGNYNF GLTEQSMFHE IDPDSIDHQR GMDITVVTTT KDDVEAKSLL
KHLGFPFKEN
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