| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0257 |
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| Symbol | rplW |
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| ID | 8708744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 285136 |
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| End bp | 285432 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482376 |
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| Product | ribosomal protein L23 |
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| Protein accession | YP_003373514 |
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| Protein GI | 283782760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGCAG TCCATAACCC AGCACATGAC GTAATTCTTA AGCCAGTTGT TTCTGAAAAA
AGTTACGCAG CTTCTGATCG TGGTCAGTAC ACTTTCGTAG TGGCTCCAGA TGCTAACAAG
GTTCAGATCA AGCAGGCTAT CGAAGAAATC TTCAAGGTCA AGGTGACAAA CGTTAACACT
TTGAACCGCG CTGGCAAGTT GAAGCGCTCT CGCACCGGTT TCGGCCGTCG TGTGAACCAG
AAGCGTGCTA TTGTCACCGT GGCTGAAGGT CAAACGATTG ACATCTTTGG TAACTGA
|
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| Protein sequence | MVAVHNPAHD VILKPVVSEK SYAASDRGQY TFVVAPDANK VQIKQAIEEI FKVKVTNVNT
LNRAGKLKRS RTGFGRRVNQ KRAIVTVAEG QTIDIFGN
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