| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0244 |
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| Symbol | |
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| ID | 8709132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 270614 |
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| End bp | 271546 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482363 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373502 |
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| Protein GI | 283782748 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAT TTGTCGTCAA TCTTTTACAT CGCATGCCTG TGCTGCTTAT TATCGTCATT
GAGGCTTCAA TGGTGTATAC AGCAACTTCT GTTGCAAAAG TAGCTTTTAG CCAATTGGAT
CCTCTGTATG CAGTGTGGTA TCGCGTAGGA TTTATGACAT TGTTGCTTTT GGCTTGGAGA
AGACCATTTT CTCGCAGCAA ACGTAGTCTT TTGCCAAAAA CGCTACGAGA ATGGGGGATT
GTTGCAGCTG TTGGCGTGTC GTTAGTTGCT ATGAACACTA TGTTCTATGT TGCTATTAGT
TGCATGGCTG TTGGTGTTGC AGTGACTATA GAATTCATAG GTCCTTTGCT TGTAGCTGTT
ATTACAGGTC ATGAATGGCG AGAGCGTGTG GGAATTGTGA TTGCTGTTTG TGGCATTATG
CTGTTGGCTA GCGCTTCTAT GCATAGTTCA GTAAGCCCGC ATTTTCTAAT TGGGTTATTC
GCCATTCTTG TTGGCGGTTC AATGTGGGGT CTATATATTG TTTCAGGTCG CATGTTGGCA
AAAAGTTCAC ACGCTATTGA TCGTGTAAGT GTTGCAGCTC TTATTGGTTG GCTGCTGCAG
TCTGTTGTTC TTGCTGTTCC TGCAGTGCAG CATGTTATTT CGCCTAAACC AGAAGCTACT
TGGGCTGCTC GCCCTGGTGG TTCTTTTGCT TTACTTGCGT TAATGTTGGT TATTGCAATA
TGTGCTTCTT TCTTCCCAAC TTTGCTTGAT CAGGTTTTAT TGAAACGTGT TACTTCTGCA
AAATACTCTG TTATACAAGC GTTGTATCCT GCAATCGCAG TTATTATTGG AATGGGATTT
GGTGAAATTC CAACATTGAC TGATATTGCA GGAATAATTC TTGTTATGTT TGCTGTAGTT
GTAACGTTTT CTGGAGATCA CAATCCTGTG TAG
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| Protein sequence | MKQFVVNLLH RMPVLLIIVI EASMVYTATS VAKVAFSQLD PLYAVWYRVG FMTLLLLAWR
RPFSRSKRSL LPKTLREWGI VAAVGVSLVA MNTMFYVAIS CMAVGVAVTI EFIGPLLVAV
ITGHEWRERV GIVIAVCGIM LLASASMHSS VSPHFLIGLF AILVGGSMWG LYIVSGRMLA
KSSHAIDRVS VAALIGWLLQ SVVLAVPAVQ HVISPKPEAT WAARPGGSFA LLALMLVIAI
CASFFPTLLD QVLLKRVTSA KYSVIQALYP AIAVIIGMGF GEIPTLTDIA GIILVMFAVV
VTFSGDHNPV
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