| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0227 |
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| Symbol | rplL |
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| ID | 8709456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 253902 |
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| End bp | 254282 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646482346 |
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| Product | ribosomal protein L7/L12 |
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| Protein accession | YP_003373488 |
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| Protein GI | 283782734 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0222] Ribosomal protein L7/L12 |
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| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC TCACTAACGA AGAGCTTCTT GAAGCTTTCG GTGAAATGAC CCTCGTTGAG
CTCTCTGAGT TCGTCAAGGC ATTCGAAGAT AAGTTTGATG TCGAAGCTGC TGCTCCTGTA
GCCGCTGTTG CCGCTGCTCC AGCTGCTGCT GGTGCTGCTG AGGAAGAGAA GGACGAGTTT
GACGTCGTTC TCACCGCTGC TGGCGATAAG AAGATTGCAG TCATCAAGGC TGTGCGTGCT
TTGACCAGCC TTGGCTTGGC TGAAGCTAAG GCTCTCGTGG ACGGCGCTCC AAAGGCTGTT
CTCGAGAAGG CTAAGAAGGA AGACGCTGAG AAGGCTAAGG CTGCCCTCGA AGAGGCTGGC
GCTTCCGTTG AACTTAAGTA G
|
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| Protein sequence | MAKLTNEELL EAFGEMTLVE LSEFVKAFED KFDVEAAAPV AAVAAAPAAA GAAEEEKDEF
DVVLTAAGDK KIAVIKAVRA LTSLGLAEAK ALVDGAPKAV LEKAKKEDAE KAKAALEEAG
ASVELK
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