| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0225 |
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| Symbol | |
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| ID | 8709445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 251497 |
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| End bp | 252891 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482344 |
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| Product | purine transporter, AzgA family |
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| Protein accession | YP_003373486 |
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| Protein GI | 283782732 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2252] Permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT TCTTCCATCT CAAAGAAAAC GGCACGAATG TATCAACGGA GATCACTGCA
GGTCTCACTA CATTCTTCGC AATGTCGTAT ATTATCGTCG TAAATCCAAT GATTTTAAGC
CAAACTGGCA TGCCTAAAGG TGGCGTTTTC CTCGCTACAA TCATCGCAGC AATCATTGGT
ACCCTTGTTA TGGGCTTGTT TGCTAACGTA CCTTACGCAC AGGCTGCTGG CATGGGTCTT
AACGCATTCT TTACTTACAC AGTTTGCTTC GGCCTGCATT TTACTTGGCA AGAGGCCATG
TGCATGGTGT TCTTGTGCGG TTTAATTAAC ATTATTATTA CCGTTACCAA GATTCGTAAA
ATGATTATTC GTGCCATTCC GACTTCGCTT CAACAAGCAA TCGGCGGTGG CATTGGTTTA
TTTGTGGCCT ATGTGGGCAT GATGAGTGTT GGCTTGATTA CTTTTACTTC CAAGGATCCT
GCTGCCGCTG CAAAGAGTAA ACCAACTGCT GCTATTCCAG GTCTTGCTGT TATGAATAAC
CCTGTGCTTT GGTTATTCCT TATTGGACTT CTTTTTGCTA TTGTTCTTAC AGTTCTTAAA
GTTCGCGCAA GCTTGCTTAT TACAATTATT GCAACTTCTT TAATTGGTAT TCCTTTGGGA
TTGACTTCTT TGAACAATGC AGTGTCTGTT ACTGATGCTT TTGCTCAGCT TCCAACTACT
TTCGGTGCTA TTTTTAGCGA TAAGGGTTTT GCATCTTTGT TTGCTGATCC TGCTCGTTTG
CCGCTTGTGT TGGTAACTAT TTTCGCATTC TCAATGTCGG ATACTTTTGA CACTCTCGGC
ACCTTTATTG GTACTGGCCG TCGTACAGGT ATCTTCTCTG AGGCTGACGA AAAGGCTCTT
GAAAACGGCT CCGGATTTAG CTCCAAGATG GATCGCGCAT TGTTTGCTGA TTCTATTGCT
ACTTCTGTTG GCGCAATTTG CGGTACTTCT AACACCACTA CTTATGTAGA ATCTGCTGCT
GGTATTGGTG CCGGTGGTCG CACTGGTTTG ACTTCCGTAG TTGTGTCTAT TTGCTTCGCG
CTTTCTATTG TTCTTGCGCC TTTTGCTTCT GCAGTTCCTG CTGCAGCAAC TGCAGGTGTG
CTTGTTGTTG TTGGTTGCAT GATGGCAAGC TCCTTGAAGG AAATTGCTTG GGACGATATT
TCCGAAGCAA TTCCTGCATT CTTTGCTGCC GTATTCATGG CGTTCTCTTA CTCCATTTCT
TACGGCATCG CTGCAGGCTT CATCATGTAC TGCTTAGTTA TGACTTGCAA GAAGCGTGCT
AAGGAAGTTC ATCCAATGCT TTGGATTGTT TCCTTGCTGT TCTTGCTTGA TTTCGTTGCT
AATGCTGTGC TGTAA
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| Protein sequence | MEKFFHLKEN GTNVSTEITA GLTTFFAMSY IIVVNPMILS QTGMPKGGVF LATIIAAIIG
TLVMGLFANV PYAQAAGMGL NAFFTYTVCF GLHFTWQEAM CMVFLCGLIN IIITVTKIRK
MIIRAIPTSL QQAIGGGIGL FVAYVGMMSV GLITFTSKDP AAAAKSKPTA AIPGLAVMNN
PVLWLFLIGL LFAIVLTVLK VRASLLITII ATSLIGIPLG LTSLNNAVSV TDAFAQLPTT
FGAIFSDKGF ASLFADPARL PLVLVTIFAF SMSDTFDTLG TFIGTGRRTG IFSEADEKAL
ENGSGFSSKM DRALFADSIA TSVGAICGTS NTTTYVESAA GIGAGGRTGL TSVVVSICFA
LSIVLAPFAS AVPAAATAGV LVVVGCMMAS SLKEIAWDDI SEAIPAFFAA VFMAFSYSIS
YGIAAGFIMY CLVMTCKKRA KEVHPMLWIV SLLFLLDFVA NAVL
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