| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0217 |
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| Symbol | |
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| ID | 8709217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 242842 |
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| End bp | 244176 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482336 |
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| Product | peptidase C1-like protein |
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| Protein accession | YP_003373478 |
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| Protein GI | 283782724 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3579] Aminopeptidase C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAAA TCACTGCTCT AACTGATGAA AAATTACAAG GTTTGCGTGA GGATTTTGAC
GCAAATCCTT TAAACCGTTT AGCTATGAAT GGTGTGACTG CTGCTGGTAT TGATAAAGTC
GCGCGTAATT ATGATCGTGC GCGCTTATTG CAGCGTCGTT TTTCTACCAT TGTTGATAAC
GGAGATGCAA CACATCAGGA TCGTTCTGGC CGTTGCTGGC TGTTTAGTTC GTTGAACGTG
GCTCGTTTCA TTGCGAAGAA ATCCCTTGGA TTGAAGGAAT TTGAGTTTTC TCAAAACTAC
GCAATGTACT ACGACAAGCT TGAGCGAATT AACTACTTCT TGAAGGATGT TGCTGCTTTG
GTGCGTGCAG GTGAGCCTTC AGATTCTCGT TTGATTCAGC ATTTGTTGCA TGACGTTATG
GGCGATGGCG GTCAGTGGAC CATGGCTATG AATGTTTACA AGAAGTATGG TGCTGTTCCT
AAGGATTTGT TCCCAGAAAC TGCTTCTTCT AAGAATACTG GTGCTATGAA TACGCAGTTG
CGTGCGCTTT TGCATACTGC TGTTGCTCAT ATGTATGCGA ATGCCACTGA AATTGATGAG
ATTATTGCGG ATGCTACTGC TGCAGGTCAC AGGATTTTGA CAATTCACTT GGGTGAGCCA
CCTAAGAGCT TCGATTGGGA GTGGACTGAT AGCGACGGCA AGTTCCATCG CGATGGTGAG
ATTACGCCAG TTGAGTTCTG GAAGAAGTAT GTGAATGCTG GTCTTGAGGA TTATGTGTGC
TTGGTTGACG ATCCTCGCGC TGAACATCCT AAGGGCAAGA AGATTGCTAT TGAGCACTTG
GGTAATGTTG CTGGCGGAGA CGCAACCGAG TATTTGAACG TGCCAAACCA GTTTATGAAG
GATTGCGTGC GTAAGATTTT GGTTGAGAAG GGCATTCCAG TGTGGTTTGG TGCCGATTGC
CATCCTATGA TGGATCGCGA GAATGGCGCT TGGGCTACTG ATTTGTTCGA GTATGGTCGC
GTTTATGGCG TTGATTTTGA TTTGGATAAG GAAGCGCGTG TGCGTTTTGC TGATTCTGCG
ATGAATCACG CTATGGCTTT TGCTGGTGTG GATGTTGCTG ATGATGGTAC GACTACTCGC
CGTTGGCGCG TAGAGAACTC TTGGGGCACT GATATTGCAG ATAAGGGTTA CTTTACGATG
AGTGACGACT GGTTTACCGA GTATGTGTAC GAAGTTGCAG TGCCGAAGAA TCTGCTTCCG
GAAGAATATC GCAAAGCCCT AGAAGAACCA GCAATCGTAT TACCGGCGTG GGATCCAATG
GGCGCATTAG CATAG
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| Protein sequence | MTEITALTDE KLQGLREDFD ANPLNRLAMN GVTAAGIDKV ARNYDRARLL QRRFSTIVDN
GDATHQDRSG RCWLFSSLNV ARFIAKKSLG LKEFEFSQNY AMYYDKLERI NYFLKDVAAL
VRAGEPSDSR LIQHLLHDVM GDGGQWTMAM NVYKKYGAVP KDLFPETASS KNTGAMNTQL
RALLHTAVAH MYANATEIDE IIADATAAGH RILTIHLGEP PKSFDWEWTD SDGKFHRDGE
ITPVEFWKKY VNAGLEDYVC LVDDPRAEHP KGKKIAIEHL GNVAGGDATE YLNVPNQFMK
DCVRKILVEK GIPVWFGADC HPMMDRENGA WATDLFEYGR VYGVDFDLDK EARVRFADSA
MNHAMAFAGV DVADDGTTTR RWRVENSWGT DIADKGYFTM SDDWFTEYVY EVAVPKNLLP
EEYRKALEEP AIVLPAWDPM GALA
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