| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0195 |
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| Symbol | argS |
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| ID | 8709604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 217453 |
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| End bp | 219249 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646482314 |
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| Product | arginine--tRNA ligase |
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| Protein accession | YP_003373459 |
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| Protein GI | 283782705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0018] Arginyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAG AAAGCTTAAG TGAATTAATT GAAAAAATTG CTAAAGATTT AGTAGCAAGC
GGTAAAGCTG GCAATCTAAC AGAAGATTTG ATTCCTGCTG CCGAAAAACT TGCAGTTATG
CGACCAAAAG ATCGTGCACA CGGCGATTGG GCTACGAACG TTGCTATGCA ACTCGCTAAA
AAAGCTGGTA TGAAGCCTCG CGATTTAGCA GAACTTTTTG CTGAGCGTTT GCAAGAAGCG
GAAGGTATTG CGCGCGTAGA AGTGGCAGGT CCTGGTTTTA TTAACATAAC GCTTGATTCT
GCTTCTGCGG CGGCGGTCGT AGACGAAGTC TTAAAGCAGG GTGCGGCTTT TGGCAAGAAT
ACGCATTTGA GCGGCAAAAC TTTGAATCTT GAGTTTGTAT CCGCAAACCC AACTGGTCCA
ATCCACATTG GTGGAACTCG CTGGGCTGCA GTTGGCGATT CTATGGCTCG AGTTTTGGAA
GCGAACGGCG CAAAAGTTGT GCGCGAATAC TACTTCAACG ATCACGGTGA GCAAATCAAC
CGTTTTGCAA AGTCTTTAGT TGCTGCAGCT CATGGCGAAG AAACGCCTGC AGACGGCTAC
AAAGGCGCGT ATATTAACGA AATTGCGGAC TCTGTTATAA AAGAAGCGAA TGCGGACGGC
GTTGATGTTC TTTCATTGCC GCGAATTGAT CTTGGAAAAG ACGAGGAAGG ATTGCCTCTT
GGCGAAGGCG ATTCCGAGCA GCGCGAAGAG TTCCGCAAGC GCGCAGTTCC AATGATGTTT
GCGGAAATTC GTAAGTCTAT GCGCGATTTT CGTGTTAGTT TCGACGTGTG GTTCCACGAA
AATAGCCTGT ACGAGGATGG CGAAGTTGAG CGCGCTATTG CAGACTTGCG TGAGCGTGGA
GATATTTTCG AAAAAGACGG CGCAACTTGG TTTGAATCCA CTAAGCATGG CGACGACAAG
GATCGCGTAA TTATTAAGTC CGACGGAAAC TACGCTTACT TTGCTGCTGA TATTGCGTAC
TATCGCAACA AGCGTCACCG CGAGCAGAAT CCTGCAGACG TAGCAATCTA CATGCTCGGC
GCGGATCATC ACGGATATAT TGGCCGAATG ATGGCAATGT GCGCGGCTTT TGGCGACAAG
CCGGGCGAAA ACATGCAGAT TCTTATTGGT CAGCTTGTAA ACGTTATGAA GGACGGAAAA
CCTGTGCGCA TGAGCAAGCG TGCTGGAAAC GTTATTACGA TTGACGATTT AGTTGATGCA
ATTGGCGTTG ACGCTTCGCG CTACTCGCTT GCTCGCACCG ACTACAACAC AAGCGTTGAT
ATTGATTTGG ATTTGCTTGC TTCTCACAGC AACGATAATC CTGTGTACTA CGTGCAATAC
GCTCACGCTC GCAGCTGCAA TGTGGCTCGC AATGCGGCTG ACGCTGGAAT TACGCAAGAT
GGCGCTGATT TAAGCTTGCT TAATACCGAG ACTGACGGCG AAGTGTTGGC TGCTTTGGCT
CAATGGCCTG CTGCTTTGGC TCAAGCTGGC GATTTGCGCG CTCCTCACAG AGTTGCGCAT
TACCTTGAGG ATTTGGCAGC AAGTTACCAC AAGTGGTACA ACCTTGAGCG TGTTGTACCA
ATGGAGTTAA CTGACCCTGA AAATCGTTTG CCAGAAGCCG AGCGTGAAGC TCAGCGCATT
GCAAAGTGCC CAGAGCCAGC TCGTGCTGCA GCTCGCTTAA AGCTTAACGC TGCTGTGCGC
ACAGTTATTG CAACTGGTCT TGATTTGCTT GGAGTTTCTG CTCCAGAAAA GATGTGA
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| Protein sequence | MNPESLSELI EKIAKDLVAS GKAGNLTEDL IPAAEKLAVM RPKDRAHGDW ATNVAMQLAK
KAGMKPRDLA ELFAERLQEA EGIARVEVAG PGFINITLDS ASAAAVVDEV LKQGAAFGKN
THLSGKTLNL EFVSANPTGP IHIGGTRWAA VGDSMARVLE ANGAKVVREY YFNDHGEQIN
RFAKSLVAAA HGEETPADGY KGAYINEIAD SVIKEANADG VDVLSLPRID LGKDEEGLPL
GEGDSEQREE FRKRAVPMMF AEIRKSMRDF RVSFDVWFHE NSLYEDGEVE RAIADLRERG
DIFEKDGATW FESTKHGDDK DRVIIKSDGN YAYFAADIAY YRNKRHREQN PADVAIYMLG
ADHHGYIGRM MAMCAAFGDK PGENMQILIG QLVNVMKDGK PVRMSKRAGN VITIDDLVDA
IGVDASRYSL ARTDYNTSVD IDLDLLASHS NDNPVYYVQY AHARSCNVAR NAADAGITQD
GADLSLLNTE TDGEVLAALA QWPAALAQAG DLRAPHRVAH YLEDLAASYH KWYNLERVVP
MELTDPENRL PEAEREAQRI AKCPEPARAA ARLKLNAAVR TVIATGLDLL GVSAPEKM
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