| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0193 |
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| Symbol | |
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| ID | 8709864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 216854 |
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| End bp | 217120 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482312 |
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| Product | toxin-antitoxin system, toxin component, RelE family |
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| Protein accession | YP_003373457 |
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| Protein GI | 283782703 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2026] Cytotoxic translational repressor of toxin-antitoxin stability system |
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| TIGRFAM ID | [TIGR02385] addiction module toxin, RelE/StbE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTTGGA AGATTAATTT ATCTAAAAGA GCTGAAAAAC AGCTAGGGAA AATTGACAAA
ACGATTGCTA AGCAAATCGT TAAGGAGCTT CGCGAAATTA GCAATCTCGA CAATCCTCGA
ATCAGAGGCA AGGCACTAAC TGGCAACTAT TCGGGATTTT GGAGATATAG AGTAAGGGAT
TACAGAATAA TTTGTGCAAT TGAAAATAAT GTACTGACCG TTTTTGTTGT GGATATTGAC
CATCGCAGCA GGATTTATAA TAAGTGA
|
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| Protein sequence | MIWKINLSKR AEKQLGKIDK TIAKQIVKEL REISNLDNPR IRGKALTGNY SGFWRYRVRD
YRIICAIENN VLTVFVVDID HRSRIYNK
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