| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0186 |
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| Symbol | |
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| ID | 8709413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 206431 |
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| End bp | 208851 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482305 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373450 |
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| Protein GI | 283782696 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1835] Predicted acyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACTT CCACTGCTTC ACAAGCAGGT CAATCCTTCA AAACAAAGAA GGTTCCTGCA
GAAAAAAATG CTAGTAAAAC GACCTCAACT AATCTTTCAA CAAACTCAAA TAATACCGTA
GAAAAAACTA TTAATAGCGC AAAAGCTGAA AATAAACAAT CATCTACTTT ACCTACAAAT
ACTGTTTCGA AGCGAAATAA AGCAATAGAC GGTTTAAGAG CTCTAGCAAT TATTGGTATT
GTATGCTTTC ATATGCGTCC AAGCCTTCTT ATGGGAGGAT TCCTTGGAGT AACACTGTTT
TTGGTATTGG CAGGATATTT TTGCACGAGA TCAGTTCTGC GCTATTTAAA CGCAGATGAA
AACGCAAAAA ATGCAAAAAA TATCGAAGAT AATAATAAAA ATACTCAAGG AATCAGGCAT
TACTGGGAGT ATTTACTAAA GCGCGTAAAA AGAATTTGGC CGCCAACACT TGGAATTATC
GCTATAACAG CACCAATTAT GTGGCTTTTT TCGCCAAGTC TACTACCAAA GTTACAAGCG
GATGCTCTTT CAGGCTCCGG ATTCTTTAGC AATATAATGT ATGTTGCTCG TAAGCTTTCA
TATTTTGAAC AGTCCGGACT ACCTTCTCCT ATCAAACATC TTTGGTATCT CGGACTTTTA
ATGCAGGCTT TTGTTATATG GCCTATTATC CTTGCTGCAC TTATTAAATT CGTGCGTAGC
AAGCTAATAC GCATGTATAT CACAGCAGGC TTAGCCATAC TTTCTTCTAT TCTTACTTTT
ACTTTTGCCT ACTTATTTAA CAATTACACA ACTCCAGCTC GCGTCTACTA TTCTCTAGAT
ACGAGAGCAT CAGAATTCTT AATGGGTGCA ATGCTAGCAA TGTACGGTGC TTGGTTTGCC
AAACATTCAT TCCACGCGTG GCTTATTCAT GCATTACATT TGCTGATGGG CAAAAAGAAC
ATATCGGTCA GCTTAGCTTC ATCAGTTAAG TTAGATAGTA ATGCAGATAG TAGTGTAGAT
AATTCAGCAC TAACGAAAAA ATCAGATAAA GCCTACGCAA ATAACGAAAA AGTATTTGCT
GAAGATGGAA TACCTGCTGA CTTGCGCGAA GGATTACAAA TTGATTTATC AGATAATAGC
GTAGCTCCAG ATATACAAGA ACTTCCAAAT AACGCATTCA ATAAGCCAAA AACTGTTTTT
TATAATCCAC TCCATGCATG GCAGAGATCT TGCATTGGAC TGTTGGCAAC AATTGTGTTG
TGCTACTGCT TCGTGTATGC AGAAGGCACA TCTTCAGTAT TTGTTTTTGG CGGATACACA
ATAACAGCAG CCGCTTGCAC ACTAATACTG TGGTCGTGCA CGCAAACTGA TAATATTTGC
TCGAGAATAT TTGCATGGGC TCCGCTCGCT TATATCGGCA GACGCTCTTT TGCAATTTAT
TTAGTTCACT TCCCTGTTCT TGAATTATTC AACCCAGCAA ATAGAACAAC TGCTGTATCT
ACAGGAGAGC AAGTCTTGCA AGCACTAGTA ATAGTTGCAC TTGCAGAATG CTTGTATCAA
TTATTTGAAA AGCCAATACA AGATCAACAA TTATTTAAGC TTATTCGCTC TGTCTCACTA
ACTTTGTGCT GCATAATTAT TGTGTCGTTA ATTATCTTGC CAGTAAATTG GCAAGATATA
GCTAAGCATA GGTCAATGCA GCTTCGCCCA GAATTGACAG CACAAGTAGA GCAATCTTCA
TCGTCAAATA AAAAACCTAC TGCTTTTGAC AAAACTAATT CTAAGCAAGA AACAAAAGAA
AAAGCAGTTC CAAAAGGTGT GCAAAAGAAT GTAGTAAAAC AGTCTCTTCC ACCTACACCA
TCGAAGTATC GCATTCTCTT CCCTATTGCG GAAAAAGTTC CACGAAATCT TGTTACTACT
CATACGCGGA TCGACAAACG ACGCAATACT TGTTCCGTAA ACTTGACTAT GGTTGGAGAT
TCTATTACTG AAGGCGCTAA ACCATATTTG ATGCAAGTTA TGCCTAACGC TTATATAGAT
GGAAAAGTGA GTAGACAAAT TTTCCACGGA GCTGATGAAT ACGAGAAAGA TATTTCGGTA
AAACACGCTG GAGATGTGGT GATTTTCGCT CTTGGAACCA ACGGTCCTCC TCATGACGAT
AGCGTGCTTC AACACATGGT TGATGTCGCA AAAGGTAGAC CTGTTTATTT CGTTACCACA
CGAGTTCCGC AACCTTGGCA GGATGCAACG AACGATAGCT TACGCAAGTT CGCAGCAACT
CATCATAATG TTGGCATTAT AGACTGGCAT GGTTTGAGTA ATGGTCACTC GGAATATTTG
ACTGACGATG GAGTTCACTT AACTCCAATC GGCGGTCCAC AATACGCGAA GATGATTCGT
TTAGCTGTAT GCGGCGGCTG A
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| Protein sequence | MNTSTASQAG QSFKTKKVPA EKNASKTTST NLSTNSNNTV EKTINSAKAE NKQSSTLPTN
TVSKRNKAID GLRALAIIGI VCFHMRPSLL MGGFLGVTLF LVLAGYFCTR SVLRYLNADE
NAKNAKNIED NNKNTQGIRH YWEYLLKRVK RIWPPTLGII AITAPIMWLF SPSLLPKLQA
DALSGSGFFS NIMYVARKLS YFEQSGLPSP IKHLWYLGLL MQAFVIWPII LAALIKFVRS
KLIRMYITAG LAILSSILTF TFAYLFNNYT TPARVYYSLD TRASEFLMGA MLAMYGAWFA
KHSFHAWLIH ALHLLMGKKN ISVSLASSVK LDSNADSSVD NSALTKKSDK AYANNEKVFA
EDGIPADLRE GLQIDLSDNS VAPDIQELPN NAFNKPKTVF YNPLHAWQRS CIGLLATIVL
CYCFVYAEGT SSVFVFGGYT ITAAACTLIL WSCTQTDNIC SRIFAWAPLA YIGRRSFAIY
LVHFPVLELF NPANRTTAVS TGEQVLQALV IVALAECLYQ LFEKPIQDQQ LFKLIRSVSL
TLCCIIIVSL IILPVNWQDI AKHRSMQLRP ELTAQVEQSS SSNKKPTAFD KTNSKQETKE
KAVPKGVQKN VVKQSLPPTP SKYRILFPIA EKVPRNLVTT HTRIDKRRNT CSVNLTMVGD
SITEGAKPYL MQVMPNAYID GKVSRQIFHG ADEYEKDISV KHAGDVVIFA LGTNGPPHDD
SVLQHMVDVA KGRPVYFVTT RVPQPWQDAT NDSLRKFAAT HHNVGIIDWH GLSNGHSEYL
TDDGVHLTPI GGPQYAKMIR LAVCGG
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