| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0160 |
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| Symbol | |
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| ID | 8708971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 181139 |
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| End bp | 182857 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482279 |
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| Product | iron permease FTR1 family protein |
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| Protein accession | YP_003373424 |
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| Protein GI | 283782670 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
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| TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.31653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGT GTGTAAAAGT GCGCCGAATT ATTCGTGACT CGGCTGCACT GATTCTGGCT
GTGTGCATGT TGGTAGGTTG CATAGTGAGC TCGTTTGTTA CAACTATTCC AGCTTTTGCA
ACAGATGCAG ATCGTTCGTA TACTAGCTGG ACAGAAGTTT CTAAAGCAAT CGACAATGAA
TTGCTACAAG GTCAATCAGA ATACAATAGT GGCAATAATT CTGGAGCTGC AACTCGATTT
GAAGCAGCAT ACAATTCCGT TTACGTTGCT TCTAACATGA TTACGGTTGT GCGAGATGCA
ATCGGGCAGA ATAAAGTTCA GGCACAAACT GATCAATTCC AGCAGCTGCA AACGCTTGTG
TACCAGCAAA ATCAAGGTTC ACAAATAAGT GCTATTTCAA CGGCTCTTGC AGCGGATGTT
GCACAAACTG CATCTAGTCT CGATGCCAAC TTAAAAGTGG ATAAGCCAAA TGTTTATGCA
CAAAAGTTGC GTGCGCAAAT TAAAGCAGAG CGCAAAAAGC TAGATGCTGC AAAAAAGAAA
AACCTTGGGC GCAATGGTCG TACGTGGGGT CAAGTTGCTC GAGAAATGAA CGTTATTCTC
GACAAATCGG TTGCAACCTA CAAGTTTGCA AAAGGTAATA AAACTCAAGT AGCATCTGCA
GTTGATTTAA TTAACGAAGC CTATTACCAG TATTACGAAA AGCTTGGTTT CGAGAAGAAC
GTGATGAATG CAATAAGCGG AAGTCGCGTT TCGACTGTCG AGTATCAATT CAAAGAGTGC
CGCCAAACAA TGAACAACGG CGGAACTATT GAGCAAGCTA AAAAATTCGT GACGGATCTT
AAATCTATGC TTATTGAAGA CGCAGCAAAA TTAGACAAAG GCGCATCTTC AAGCGCAAAT
CCATTTATGC AATTCATAAC TAGCTCATTC GGTCAGGCTT TCGTAATTTT GCTTCGTGAA
GGTTTGGAAG CGTTGCTAGT TGTTGCAGCA ATTATTGCTT ACCTCGTTAA ATCCGGTCAC
AAGAATATGG TGAAGTATAT TTACCTAGGT ATTGCGGCTG GAATTGTGGC ATCTCTTGCT
GTAGCTGCAC TATTCGGCTT GCTATTTAAT GGCTCTGGTC CGCAGCAGGA GATTACAGAA
GGCGTTGTTG CATTGTTCGC AATGCTTATG CTGCTTTACA CGAGTAACTG GATGATTTCT
AGATCTTCAG TGCAAGCATG GAATAAGTAT ATTAGTGAGC AAACAACGGC AGCAGTTTCT
AAGGGAAGCT TGGTTTCTTT AGCGTTATTG AGTTTCCTTG CGGTGTTCCG CGAAGGTGCA
GAAACTGTAA TCTTCTATCA AGCAATCTTT GCAGTTTCAA ACGGAGCTGA CTCTATGATT
TGGGGAGGCT TCATTTCCGC TGCTGCAGTT CTTGTAGTGA TATTCTTGCT GATTCGTTTC
GCATCTGTGC ACATACCAAT TCGCCCATTC TTTACTGGAA CAAGTGCTCT TATGTCTGTT
CTCGTAGTGA TTTTTGCAGG CGGTGGTGTG CACGCGTTAA TCGAGGGCGA TGCTCTCGAA
GGAATGTATA TTCAAGGCTT GCCAACTAAC GATTGGCTTG GGTTCTATCC GTATGTTGAG
ACGATTGTTG CTCAAATTGT GGCAGCAATT GTTGTGATTT CACTGCTTTG CGTATCTATT
GCGCGAAGTC GTGTGAAACG AGCGGTAGAA AATAAATAA
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| Protein sequence | MRACVKVRRI IRDSAALILA VCMLVGCIVS SFVTTIPAFA TDADRSYTSW TEVSKAIDNE
LLQGQSEYNS GNNSGAATRF EAAYNSVYVA SNMITVVRDA IGQNKVQAQT DQFQQLQTLV
YQQNQGSQIS AISTALAADV AQTASSLDAN LKVDKPNVYA QKLRAQIKAE RKKLDAAKKK
NLGRNGRTWG QVAREMNVIL DKSVATYKFA KGNKTQVASA VDLINEAYYQ YYEKLGFEKN
VMNAISGSRV STVEYQFKEC RQTMNNGGTI EQAKKFVTDL KSMLIEDAAK LDKGASSSAN
PFMQFITSSF GQAFVILLRE GLEALLVVAA IIAYLVKSGH KNMVKYIYLG IAAGIVASLA
VAALFGLLFN GSGPQQEITE GVVALFAMLM LLYTSNWMIS RSSVQAWNKY ISEQTTAAVS
KGSLVSLALL SFLAVFREGA ETVIFYQAIF AVSNGADSMI WGGFISAAAV LVVIFLLIRF
ASVHIPIRPF FTGTSALMSV LVVIFAGGGV HALIEGDALE GMYIQGLPTN DWLGFYPYVE
TIVAQIVAAI VVISLLCVSI ARSRVKRAVE NK
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