| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0126 |
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| Symbol | dnaX |
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| ID | 8709637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 145079 |
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| End bp | 147484 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482247 |
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| Product | DNA polymerase III, subunit gamma and tau |
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| Protein accession | YP_003373393 |
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| Protein GI | 283782639 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTG CACTGTATCG TAGATATCGT CCTGACACGT TTGATGGTGT TATTGGGCAG
GATCAGGTTA CCATACCTTT GTCTAGAGCA TTAGACCAAG GGAAAATAAC GCATGCATAT
TTATTTTCTG GACCACGTGG ATGCGGTAAA ACAAGTTCTG CGCGAATTTT AGCTCGCTGC
ATTAATTGCG AAAAAGGACC AACTTCGCAC CCATGCGGAG AGTGCCAAAG CTGTAAAGAT
TTAGCTACTG GCGGTGCAGG TTCTATCGAC GTTGTAGAGA TTGATGCTGC AAGCCATAAC
GGTGTCGATG ATGCTAGAGA GTTGCGTGAG CGTGCTGGTT TCGCTCCTGC TCGTGACCGT
TATAAGATTT TCATTCTCGA CGAAGCTCAT ATGGTTACAC AGCAAGGTTT TAATGCTTTG
CTTAAGATTG TAGAAGAGCC GCCTGAGCAT GTAATGTTTA TTTTTGCTAC CACTGAGCCG
GATAAAGTTA TTGGCACTAT TCGCTCGCGT ACACACCATT ATCCTTTCAG ACTTGTGCCT
CCAGAGGTAA TGTCTCCATA TCTTGAAGAT ATTTGCAAAA AGGAAGGTAT TCTGCCGCAG
CCGGGAGTTC TTCGCCTTGT TATGCGCGCT GGTGCGGGAT CAATGCGAGA TACGTTATCT
GTGCTCGATC AGCTTATGGT GGGTGCTGTT GATGGTTCAA TTTCTTTGGA TTCTGCGGTT
GCTTTATTAG GTTTTACGCC TAATTCATTG ATTAGCGAAT TCATTGACGA TCTTATTAAT
CATGATGGTG CTTCGATATA CGATGTAGTT CGTCGCGTTA TTGTTGGAGG TTACGATACT
CGTAAGTTTG TAGAAGATTT ATTAGGTAGA GTTCGTGATT TGTTGCTTAT GGTATCTGCA
GGTCCTAAAG CGGCTTCAAG CTTACTTAAT GATGTTTCTC CAGAAGATTT GGAAATATTG
AATAAGCAAT CTGCAAGCAT GACATTGCAT GATTTAGCAC GTATGGCTCA AACAATTAAT
GATGCTTTAA GTGCAATGGC TAGTGCAATT TCTCCTCGCA TGAATTTGGA AATTTTAGTT
GCTCGTTTGC TTGCAGACAG CGAAACTTCA AATACTGTTG CAACTAATTT GCGCATCAAT
AACGTGCAAC AACAAAATAT TTCCACTTCT ACGCAGAATA TTCAAAATAA AGTATCTTCT
GGTGCTCATT TCGTAGGTTC TACAAGCAAT AAGAAATATG TTTCTGCAGA TAGTGAGAAT
AATAGTACTT CAAATTCTTC ACTACCTTCT GAAACTACAG CATCTCCTAT TGCTAAAGCA
GAAACGCAAT CTGCTACAAA CACAAAAGAA ACGGAATCTA AAAAAGTGTT TTTGAACGAT
GCACATAATG CTAATTCAAA GAATGATTCC ATGGATACTG ATGCAATGTG GGATAAAGTA
GTTTCAAAAT TGCCTGATGA CGTACGTGAG TATGTAACTC GTGAGTATGT TCCTACAGTG
CAACTTACTT CAGCACAATC AGGTCGACAG CGTCTTATTT TGACTTTTAA TGAGCCTATG
AGTCAACATG CGTTTGCGCT CGCAGTATGC ACTACTTCTC CATATGATGG ACAAAAAGTG
CCAAAAGTAG TAATGAATGA AGTGCATGAG ATATTTGGCA CGCAAGTAAT GATTGCTCCT
GCACCAGTTG CTGCTAATGG TGAACAAGTA GAATCTGTTG CTCGAATGGA TCCGCAGAAG
CTTGCAAAAG TTAAGCGCGA TATTTTATTG CGTAAAACAG GTATATCTGC TGGTTTTAGT
AATAAAACTG ATTCTGATAG CAGCGGAATA AATAAAAATC CTACTAAAAA AGAATCTTCG
GGTTTTAGTG GCGCTGATGG CTCCGCAGCA TCAGTAGCTT CTGAAAATAC TGCGGATGAG
TTAAGTGATG TTGCGAATGC GGATGATGAT GTTTGGGCAG ACATGTCGTC TATGCCTATG
TCGGATGTGA TTGCAATGCC AGAAAACTCT TCTTCTGAAG AGTCTTCTTC TAAAGGCTCT
TCTATTGAAG ATGAGCCTAT GAATCATGAT GACGAGATTA CAATACAGAA GAGTTCGCAT
TCTCATAACC AAGATGAAGC TATTTCTGGT GTCTTGGATC AAGATAAACT ACAGTCTCAA
GTTCAGAATG CAACTAATAC TTCAGAATTG TCTGCTGAAT CAATTCAGAC TACTGTTTCT
CCTACGAATG GAGCTACTGC TGACGAATGT TCAATGGATG ATGCTTCATT AGAATCAGCA
ACATCTGTAA GCACTGATGA GCTTAAACAA ATTTTTGAAG TTAAATCTGT TGAAGAATTT
GCTTCCACTG ATCCTAAAAA TCCTAAAAAT GCGATTATGA GCGTTAAGAA AAAGCAAGAG
GAGTAG
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| Protein sequence | MALALYRRYR PDTFDGVIGQ DQVTIPLSRA LDQGKITHAY LFSGPRGCGK TSSARILARC
INCEKGPTSH PCGECQSCKD LATGGAGSID VVEIDAASHN GVDDARELRE RAGFAPARDR
YKIFILDEAH MVTQQGFNAL LKIVEEPPEH VMFIFATTEP DKVIGTIRSR THHYPFRLVP
PEVMSPYLED ICKKEGILPQ PGVLRLVMRA GAGSMRDTLS VLDQLMVGAV DGSISLDSAV
ALLGFTPNSL ISEFIDDLIN HDGASIYDVV RRVIVGGYDT RKFVEDLLGR VRDLLLMVSA
GPKAASSLLN DVSPEDLEIL NKQSASMTLH DLARMAQTIN DALSAMASAI SPRMNLEILV
ARLLADSETS NTVATNLRIN NVQQQNISTS TQNIQNKVSS GAHFVGSTSN KKYVSADSEN
NSTSNSSLPS ETTASPIAKA ETQSATNTKE TESKKVFLND AHNANSKNDS MDTDAMWDKV
VSKLPDDVRE YVTREYVPTV QLTSAQSGRQ RLILTFNEPM SQHAFALAVC TTSPYDGQKV
PKVVMNEVHE IFGTQVMIAP APVAANGEQV ESVARMDPQK LAKVKRDILL RKTGISAGFS
NKTDSDSSGI NKNPTKKESS GFSGADGSAA SVASENTADE LSDVANADDD VWADMSSMPM
SDVIAMPENS SSEESSSKGS SIEDEPMNHD DEITIQKSSH SHNQDEAISG VLDQDKLQSQ
VQNATNTSEL SAESIQTTVS PTNGATADEC SMDDASLESA TSVSTDELKQ IFEVKSVEEF
ASTDPKNPKN AIMSVKKKQE E
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