| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0116 |
|---|
| Symbol | |
|---|
| ID | 8708913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 137894 |
|---|
| End bp | 138313 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 646482237 |
|---|
| Product | CrcB-like protein |
|---|
| Protein accession | YP_003373383 |
|---|
| Protein GI | 283782629 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0239] Integral membrane protein possibly involved in chromosome condensation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCAG TAATTTCTTC TTATGCGCAC ACGATTCACC AAGTAGACGG ACAATCATTT
ATATTTGGCC AGCTTACTTT AGGGACTTTT TTGTCAAATA TGATTGCATG CTTTATTTTT
GCTCTTGTTA CTGCAATATC TGTTAAAGCT TTAACGCAAG AAAAGCAAAC TTTGTATAAA
TATGCGCTAG GAACAGGCTT TTGTGGCGGA TTGTCGACTA TGTCTACTTT CGCGTTTGAA
AGTGCAATGT CTTTTATGGC TCCACGCATG ACGCTTGTTG TTTTGGGCAT GCTTTTTTCG
CTGCTTTTTG GCGTTTTTAT GGCTTTTGTT GGTAATTGGG TTGGAGCAGG AATTGCGAAT
TGCATGAATA AAAAGCAAAG TCGATCTGTT GCAGAAGCTA ATACTAAGGT GATGAAGTGA
|
|---|
| Protein sequence | MRAVISSYAH TIHQVDGQSF IFGQLTLGTF LSNMIACFIF ALVTAISVKA LTQEKQTLYK
YALGTGFCGG LSTMSTFAFE SAMSFMAPRM TLVVLGMLFS LLFGVFMAFV GNWVGAGIAN
CMNKKQSRSV AEANTKVMK
|
|---|
| |