| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0113 |
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| Symbol | |
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| ID | 8709479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 134755 |
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| End bp | 135096 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482234 |
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| Product | chorismate mutase |
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| Protein accession | YP_003373380 |
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| Protein GI | 283782626 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01795] monofunctional chorismate mutase, alpha proteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGATT TTTCTGAAAC AACGGTTGAC GCACGCGATA CATCTCTTAC GACATGTTGC
AAAGTTGCTG CCGAAGAGAT TATTGTGTTG CGTCAATCTG TTGATAATTT TGATAATGCA
ATAATTGCGC TGCTTGCTGA GCGGTTTAAA ACTACGAAAC GAATTGGTGA GTTGAAGGCT
GAAGCTGGAT TTGCTCCTGA GGATTCTAAA AGAGAGCAGC AGCAAATAGA AAGTTTGCTA
AATATTGCGG AAAATGCCGG ATTAGATTCT TCGATTGCGT TGAAATATCA CGAGTTTGTT
GTTACTGAGG CTAAGAAACG TCATCAGCAA ATGCAGTCTT GA
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| Protein sequence | MCDFSETTVD ARDTSLTTCC KVAAEEIIVL RQSVDNFDNA IIALLAERFK TTKRIGELKA
EAGFAPEDSK REQQQIESLL NIAENAGLDS SIALKYHEFV VTEAKKRHQQ MQS
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