| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0112 |
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| Symbol | |
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| ID | 8709893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 134288 |
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| End bp | 134749 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482233 |
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| Product | transcriptional regulator, AsnC family |
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| Protein accession | YP_003373379 |
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| Protein GI | 283782625 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAA ATCCTCATAA AGCTGAAACT AGTATAGCTA TGGATTCAAC TGATGCAATC
ATTGTTGATA TTCTCGAACA TGATGGTCGA GCGACGTTAA CTCGTTTGGC GAAGGCTTCG
GGTTTGTCTG TTTCTGCAGT TCAATCTCGA GTGCAAAAGC TTGAGCGTAA AGGTGTTATT
ACTGGTTATC GCGCGTTAAT TGATTATGAG CGTCGTGGTT TACCTGTAAG CGCATTTGTG
TCTGTTACGC CACTTGATTT TGGGCAGGAA GCTACAATAC CTAACAAATT GCGTGATATT
TCTGGTATTG AAGCTTGCTA TTCGATTACT GGTAGTCCAA GTTTTATGCT GGTAGTGCGT
GTTGCTACGC CAAGCAAATT GGAAGAACTT ATTAATACCA TTCATCGCAT AGTCCCTGTC
AGTACAGAAA CAACTATGGT TCTGCAAACA TATTTCGATT AA
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| Protein sequence | MAGNPHKAET SIAMDSTDAI IVDILEHDGR ATLTRLAKAS GLSVSAVQSR VQKLERKGVI
TGYRALIDYE RRGLPVSAFV SVTPLDFGQE ATIPNKLRDI SGIEACYSIT GSPSFMLVVR
VATPSKLEEL INTIHRIVPV STETTMVLQT YFD
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