| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0034 |
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| Symbol | |
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| ID | 8709651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 40321 |
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| End bp | 41985 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482157 |
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| Product | protein phosphatase 2C |
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| Protein accession | YP_003373305 |
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| Protein GI | 283782551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0631] Serine/threonine protein phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA TCAATTCAAA TAACGAAGAA GAAATTCAGA CCGCAGTTAC TGGGCAAATA
GAAAAAATAT CATCTATAAC AGATAAAAAT GATATTAAAG AAAATCGCGC AAATTCTGTA
GAAAAAATAC TTTTTATGTA TGCTACGGCT GTCAGTGATG TTGGAACTGT TCGTAGTAAT
AATCAAGATT CTGCATTTGC TGGTGAACAT TTAGCTGCAA TTTGCGACGG AATGGGTGGT
CATGCTGGAG GAGATACAGC TTCTACTATA GCGATTCGTT CTCTTGCACA TATTGAACAA
GATTCAAGAC CGCATGATGT TAAAACTGTT TCTTCAATGA TGGAAACATC GATTATGGCT
GCTCATGATG CGATTGTTGG TAAAGCTAAG CGTGAGCGCC GTCTTGCTGG AATGGGAACG
ACAGTTACTG CAGTAACTCT TGTAAGAGGA TACTGGGTTC TGGCTCATTT AGGTGATTCT
AGAGCGTATC TACTAAGAGA TAATCATCTT ATGCGCATGA CTACTGATCA TAGTTATGTT
CAGCATTTGA TTGATACAGG TCATATTACG CCTGAAGAAG CGCGAAATCA TCCTCAACGA
AATGTTGTTA TGCGAGTACT AGGTGATTTT GATATAGATC CTCGTCCTGA TATTGCTTTG
CGTTCAGCTC ATCCTTCTGA TCGTTGGCTT CTTTGCTCTG ATGGATTGTG TGGAGTTCTT
GAAGATTCAA CTATTCAAGA TGTGATGAGT AGTATTTCTA ATCAAGAAGA ATGCGCTCAA
AAATTAGTAT CTATGGCACT TCGTGCTGGT AGTACAGATA ATGTTACAGC CGTTATTGCA
GATGCAACGC TTGCACTTGA TGCTGATGCA TTTGATCTTC CGCATCAAAC TCCACTTATT
GGAGGAGCTG CAAGTAAGGA TCTCGAGTCA ATTGCAGATA TCGTAAATAA AGCAGTAGCT
TCAGCACCGG CATTGCGCGA AGATAAGAAT TCACCAGCTC AAAGAGCAGC CGCGCTAGCT
CAAGATGATG ATAATTCTAA AAATCCAGAT GAAGGAACAA TATCTATTAC AAGAATTGTG
CAACCTTCAC ACATTCGTGA AGAAGTTGGA GAATTACATA CACCTGACAC TAATGAGATC
CCTATAGTCA AAAAAAAGAA TGGTAAAGTT TCAACAGATC CTCATGATCC AGATGTTGCT
CGTGCTGTTA AACATGAGCA GGATGAGGCA CATCGTGCTC ATTCATTGAG GCGTAGATGG
ACTCGCATAG GCATATCTTT GGGAATATTA CTAGTATTAT TTGTTATTTC TGGAGTAGGT
TACGGAGTAT ATGCGTGGAC TCAAACGCAA TATTATATTG GAAAAGACAG TAACAAAGTT
GTTATTTATC AAGGAGTGCC AACAAATATT TTTGGTATTG CATTATCTCA CAAAGTGGAA
TCTACTGACA TCCCTGTTAA TAAACTAGAT AAATCTTGGC AGGATCAATT AAAAGAAGGT
ATTAGTTTTG GCAGCTTAGT TGAGGCTCGT GGTCATGCTT CGTTAATTCG TCGAGAAATG
CGTGCGCGAG AACAAGAAAA ACTTAATGAA CAGAATCAAA AGAAATTAGA AAATAAAATA
AATAAAAATA AAGATAACGC GAAGCAAGGG GGTAAAACCT CATGA
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| Protein sequence | MKQINSNNEE EIQTAVTGQI EKISSITDKN DIKENRANSV EKILFMYATA VSDVGTVRSN
NQDSAFAGEH LAAICDGMGG HAGGDTASTI AIRSLAHIEQ DSRPHDVKTV SSMMETSIMA
AHDAIVGKAK RERRLAGMGT TVTAVTLVRG YWVLAHLGDS RAYLLRDNHL MRMTTDHSYV
QHLIDTGHIT PEEARNHPQR NVVMRVLGDF DIDPRPDIAL RSAHPSDRWL LCSDGLCGVL
EDSTIQDVMS SISNQEECAQ KLVSMALRAG STDNVTAVIA DATLALDADA FDLPHQTPLI
GGAASKDLES IADIVNKAVA SAPALREDKN SPAQRAAALA QDDDNSKNPD EGTISITRIV
QPSHIREEVG ELHTPDTNEI PIVKKKNGKV STDPHDPDVA RAVKHEQDEA HRAHSLRRRW
TRIGISLGIL LVLFVISGVG YGVYAWTQTQ YYIGKDSNKV VIYQGVPTNI FGIALSHKVE
STDIPVNKLD KSWQDQLKEG ISFGSLVEAR GHASLIRREM RAREQEKLNE QNQKKLENKI
NKNKDNAKQG GKTS
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