| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9154 |
|---|
| Symbol | |
|---|
| ID | 8672500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10098824 |
|---|
| End bp | 10099504 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003344517 |
|---|
| Protein GI | 271970321 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.231214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTGC CTTTGCGGTT AAGTCGCGGC CAAGCCAAGG CGCGCACCCG CAACCGCCTG
CTGGCCGCGG CCGCCGAAGT CATCGCAGAA CAAGGTTTCG CTGGGGCCTC CGTCGACGAG
ATCGCCTCCA GGGCGGGCCA CACGGTCGGT GCCCTCTACT CCCATTTCGC CGGGAAAGAT
GAGTTGTTCC TCACTCTCTT CGACGAGCAC GCCGCCCACC GCCTTGACAG CGTCGAGGAA
ATCGCCTCCC AATGGGAGGA GGACCAGACC GTTTTCGCCG CGCTCGGTGA GTATCTGGCC
GAGATCGCCG ATCGCCACAC GGTATGGAGC ACACTGGAAA TGGAGTTTCT GCGCTACGCG
CTGACCCGTC CGGAATTGCT CGACCGTCTG GCGGCCCACT GGCGGGCTCC CCGTACGGCC
GTCGCCCGCC TGGTGGCCCC GCACTGCGCC GCGCACGACC CGGTCGCCGT CTCGACCGCG
ATCATCGGGC TCCTCGAAGG GCTCGTCACG CAGCGCCGCG TCGACCGCGC CGCGGTGCCG
TCCGAACTGT TCGCCGAGGC GCTGCGCTGG CTTACGGCCG GACTCGCCCA CCCTCCCGGA
CCGGCGGCCG CCAACCCGCC GCAGCCCCCG CGGCCGGCAT GCCGGGAGGC CGGCCGTAAG
CACGCCGGGA GGTCCTCGTG A
|
|---|
| Protein sequence | MSVPLRLSRG QAKARTRNRL LAAAAEVIAE QGFAGASVDE IASRAGHTVG ALYSHFAGKD
ELFLTLFDEH AAHRLDSVEE IASQWEEDQT VFAALGEYLA EIADRHTVWS TLEMEFLRYA
LTRPELLDRL AAHWRAPRTA VARLVAPHCA AHDPVAVSTA IIGLLEGLVT QRRVDRAAVP
SELFAEALRW LTAGLAHPPG PAAANPPQPP RPACREAGRK HAGRSS
|
|---|
| |