Gene Sros_8940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8940 
Symbol 
ID8672278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9875028 
End bp9876413 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID 
ProductL-lysine 2,3-aminomutase 
Protein accessionYP_003344315 
Protein GI271970119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTTGA AGGAAGGCTC TGCGCGCGGC TTCCGGGCCT ACACCGCCAA GCATCTGGAC 
GACCTCCTGC TACGGGCCGG CCTCGGGGAC GAGGAGCGGC TCCGGATCAG GGCGGTGGCG
ACCGTCCTGC CCTTCCGTAC CAACGCCTAC GTGGTGGATC AGCTCATCGA CTGGTCGGCC
ATCCCCGATG ACCCCATATA TCGTCTGGTC TTCCCTCAGG CGGACATGCT GCCCGAGCCG
GACGTCACCA GACTCGCAGG TCTCCTGCGC GCCGGCGCCC CGAACGCGGA AATCCAGGCG
GCGGCACGCG AGGTCAGGAT GCGGCTCAAC CCGCACCCGG CCGGTCAGCT CGACCTCAAC
GTCCCGCGCG TCGGCGAGGA CCCGATGCCG GGGATGCAGC ACAAATATCC GGAGACGGTG
CTCTTCTTCC CCAAGCAGGG CCAGACCTGT CACGCGTACT GCACCTACTG CTTCCGGTGG
GCGCAGTTCA TCGGGGAGCC CGATCTCAAG TTCGCCTCCG ACGATGTCGA CAACCTCGTC
GGCTACCTGA AGAAACACCC CCGGGTGACC AGCGTGCTGT TCACCGGCGG CGATCCCATG
ATCATGAGTG AGTCGGTGCT CCGCCGCTAC CTGGAGCCGC TGCTCGAACT GGAGCAGCTC
GAATCCATCC GCATCGGCAC CAAGTCGCTG GCCTACTGGC CGCAGCGGTT CGTCTCCGAC
CCCGATGCCG CCGACACGCT GCGCCTGTTC GCGTCCGTGG TGGACGCGGG CAAGAACCTG
GCCTTCATGG CGCACTTCTC GCACCCGAGA GAGATGGAGT CCCCCGTCGC CGAGGCCGCC
GTGGCCGGGA TCCTCGCCAC CGGCGCGGTG ATCCGGACCC AGGCGCCGCT GATCAGGACG
ATCAACGACG ACCCCGCGAC CTGGTCGTCC ATGTGGCGCA GGCAGCTCAC CATGGGCATG
GTGCCCTACT ACATGTTCGT CGAACGGGAC ACCGGGCCCC AGGACTACTT CGCGGTCCCC
CTCGCCCGCG CCCACGAGAT CTTCAGGGAC GCCTACGCGA GCGTTTCGGG ACTGTGCCGC
ACGGTGCGGG GTCCCTCCAT GTCGGCCACG CCCGGCAAGG TCTGCGTGGA CGGCGTCGCG
GAGATCGCGG GGCAGAAGGT CTTCGTGCTC CACCTCATCC AGGCGCGCGA CCCCGAGCTG
GTCGGGCGTC CCTTCTTCGC GCGCTACGAC CCCACGGCCG CGTGGCTGAC CGATCTGCGA
CCGGCGTTCG CCGACCGCTT CCCCTTCGAA TCCTCCGAAC TTCCCGAGCT TCCCGAGCTC
CCTGAGCTTC TCGGCCCCTC CGACCCCTTC GAGCCGGCGA CGGTCCCCCA GCGGCTGTCC
GCCTGA
 
Protein sequence
MILKEGSARG FRAYTAKHLD DLLLRAGLGD EERLRIRAVA TVLPFRTNAY VVDQLIDWSA 
IPDDPIYRLV FPQADMLPEP DVTRLAGLLR AGAPNAEIQA AAREVRMRLN PHPAGQLDLN
VPRVGEDPMP GMQHKYPETV LFFPKQGQTC HAYCTYCFRW AQFIGEPDLK FASDDVDNLV
GYLKKHPRVT SVLFTGGDPM IMSESVLRRY LEPLLELEQL ESIRIGTKSL AYWPQRFVSD
PDAADTLRLF ASVVDAGKNL AFMAHFSHPR EMESPVAEAA VAGILATGAV IRTQAPLIRT
INDDPATWSS MWRRQLTMGM VPYYMFVERD TGPQDYFAVP LARAHEIFRD AYASVSGLCR
TVRGPSMSAT PGKVCVDGVA EIAGQKVFVL HLIQARDPEL VGRPFFARYD PTAAWLTDLR
PAFADRFPFE SSELPELPEL PELLGPSDPF EPATVPQRLS A