Gene Sros_8935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8935 
Symbol 
ID8672273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9870647 
End bp9871588 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-type polysaccharide/polyol phosphate export systems permease component-like protein 
Protein accessionYP_003344310 
Protein GI271970114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CGGAATCCGC GATCGCGGAC GCCCAGGCGG GCGGCCCGAG TAACGGCACC 
CCAGACAAGG GGCAAGAGCC GCTGGCCAAG CTCGCCGAGC GTTACGGACT TCGGCGTGCC
ATCGCACGCC CCAGTCTGCC CGTCTACCTG CGTCAGTTGT GGGAACGACG GCACTTCGTC
ATGACGTACG CGACCTCGCG CAACGTCTCG AAGTACAGCA ACTCAGCCCT GGGCCAGCTC
TGGCAGGTCC TCACCCCGCT GATGAACGCC GGGATCTACT GGCTGATGTT CGGCCTGATC
CTGGGCGCGG ACAAGGGGAT CCAGAACTAC CCCGCCTTCC TCATCACCGG GATGTTCGTC
TTCACCTACA CCCAGCGCTC GGTGAGCAGC GGCGCCAAGT CGATCTCCGG CAACCTGTCG
CTGATCCGCG CCCTGCACTT CCCCCGCGCG GCGCTCCCGT TCGCCTACAC GATCCAGGAG
TTCCAGCAGC TGCTGATCTC CATGGGCGTG CTGGTCGCGC TGGTGCTCGT CACCGGCGAG
GCGCCCACAT GGTTCTGGCT GCTCATTCCG GTCGCCCTGC TCCTGCAGAC CATGTTCAAC
GTCGGCGCCA GCCTGGTCCT GGCCCGCGTC GGCTCCACCG CCCGCGACCT GAACCAGCTC
CTGCCGTTCA TCATGCGCAC CTGGCTCTAC GCCTCCGGCG TGTTCTTCTC CATCCAGGGG
AAGGTGGTGG GCGCCGAGGG AGACGTGGTC CGGCAGTGGA TCGCCGACAT CATGTACTTC
AACCCCGCCG CCGCCTACAT CGAGCTCATG CGCGACCTGC TCATGGAGTC GCATGCCCCC
CGGCCGTACA TCTGGTACGT CTGCATATTC TGGGCGGTGT TCGCCTTGAT CGGTGGCTTC
TGGTACTTCT GGCGAGCCGA GGAGAAGTAC GGCCGTGGCT GA
 
Protein sequence
MSQPESAIAD AQAGGPSNGT PDKGQEPLAK LAERYGLRRA IARPSLPVYL RQLWERRHFV 
MTYATSRNVS KYSNSALGQL WQVLTPLMNA GIYWLMFGLI LGADKGIQNY PAFLITGMFV
FTYTQRSVSS GAKSISGNLS LIRALHFPRA ALPFAYTIQE FQQLLISMGV LVALVLVTGE
APTWFWLLIP VALLLQTMFN VGASLVLARV GSTARDLNQL LPFIMRTWLY ASGVFFSIQG
KVVGAEGDVV RQWIADIMYF NPAAAYIELM RDLLMESHAP RPYIWYVCIF WAVFALIGGF
WYFWRAEEKY GRG