| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8624 |
|---|
| Symbol | |
|---|
| ID | 8671960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9519601 |
|---|
| End bp | 9521130 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003344009 |
|---|
| Protein GI | 271969813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.388078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACCG TCGCCGAACG AGCACGTCTG GAGACGCCTC CAGGCGACTG GAGCGCACGC
CTGTGGGCGT TCCTACGCCG CCACCGCGTC TTCGTGGCCG CGCTCTCGCT GGCGTTCGTG
CTGCGTGTCG TCACCATGCT CGGGTACGGC CCGGCGCTGT GGTTCAACGA CTCCTTCGAA
TACGTGTCGG GGGCGGTCAA CCCCGACAGG CCCAGTGCCC TGCGCCCGAA CGGTTATTCC
TTCTGGCTCC TCCTGCTGCG CCCCTTCCAC AGCTTCGGCC TGGTGGCCTT CACCCAGCAC
CTGATGGGCC TGTCCATCGC GGTGCTGGTC TACGCGCTGC TGCGCAGGAG GTTCGGCCTG
CCCGGCTGGG GGGCGACGCT GGCCACGGTG CCGGTGCTGT TCGACGCCTA CCAGATCCAG
CTCGAACACC TGATCATGTC CGACACGATG TTCATGCTGC TGGTCGTGGG CGTCGTCACG
CTGGTGCTCT GGCACCGGAA GATGTCCTGG CGGCTCGGCG CGGTCATCGG CCTGCTGCTC
GCCCTCACCG CACTGACCCG GTCGATCGGG CTGCCGATCC TCGCCCTGGT CAGCGCCTAC
ATGCTGATCA AGCGCACCGG CTGGAAGCCG ATCACGGCGA TGTTGACCGC GTGCGCGCTC
CCGGTGGTCG CCTACATGGG CTGGTTCGCC TCCGCGCACG GCACCTTCTC GATGACCAGC
AGCGACGGGG CGATCCTCTA CATGCGGACC GCGCTGTTCG CCGACTGCAG GAAGATGGAG
CTCGACCCCC GTAAGGATCT CGAGATCGCG CTGCTGTGCA TCACCGACCC GCCGAGCGAG
CGCAGCTTCT CCGGCCAGAA CTACCTGTGG TGGGCCAGGG GCGGCCAGCG CTTCCACGCC
TTCGGGACGG GCAGCACGTT CACCCCGCAG ATGAACCAGG CCGCCGGGAC GTTCGCCAGG
CGGGCCATCA TGTCCCAGCC CGGCGACTAC CTCGCCCGGG TGGCTCTCGA CTTCTTCCGC
GCCTTCCAGT GGGGCCGGCC GCGCTTCCCC GACTACGCGA CCTTCCAGCA GTACGAGTTC
TCCTTCGAGG ACAAGGTGCT CCCGGCCTGG GCCTCCTACA AGGGCAACAC CGACACCGAC
GCGCGCAAGT ACGACCCGAG CCTGCCGACC GCCGAGATCC GCGGGCGGCC GAGCGTCGTC
GGCACCCAGG TCCACGACCC GTGGGCCTCC TTCATGCAGG CCTACCAGCG GACGGTCCGG
ATGCCCGGCA TCGCCGTCGG CGTCCTGCTC CTGATCGGCC TGGCCGGGGT GGCGGTGCGC
TGGCGCAAGC TGGGCGGACC GGTGCTCCTG CCCTGGCTGG CCGCCTTCGG GCTCATCCTG
GCCCCGGCCG CGACCGCCGA GTTCGACTAC CGCTACCTGC TGCCCGCGGT GCCGCTGGCC
TGTCTCGCCG CCGCGATCTC GCTGCGCCGC GGGTTCGCTA GGCCCACCGC GAGAAAAGCA
TCCGCGTCCA CCACTGCCCG TGCGGAATGA
|
|---|
| Protein sequence | MVTVAERARL ETPPGDWSAR LWAFLRRHRV FVAALSLAFV LRVVTMLGYG PALWFNDSFE
YVSGAVNPDR PSALRPNGYS FWLLLLRPFH SFGLVAFTQH LMGLSIAVLV YALLRRRFGL
PGWGATLATV PVLFDAYQIQ LEHLIMSDTM FMLLVVGVVT LVLWHRKMSW RLGAVIGLLL
ALTALTRSIG LPILALVSAY MLIKRTGWKP ITAMLTACAL PVVAYMGWFA SAHGTFSMTS
SDGAILYMRT ALFADCRKME LDPRKDLEIA LLCITDPPSE RSFSGQNYLW WARGGQRFHA
FGTGSTFTPQ MNQAAGTFAR RAIMSQPGDY LARVALDFFR AFQWGRPRFP DYATFQQYEF
SFEDKVLPAW ASYKGNTDTD ARKYDPSLPT AEIRGRPSVV GTQVHDPWAS FMQAYQRTVR
MPGIAVGVLL LIGLAGVAVR WRKLGGPVLL PWLAAFGLIL APAATAEFDY RYLLPAVPLA
CLAAAISLRR GFARPTARKA SASTTARAE
|
|---|
| |