Gene Sros_8555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8555 
Symbol 
ID8671889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9439100 
End bp9440275 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003343940 
Protein GI271969744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GCGACCTCTG GGCCGAAGCC CTGGCCGGCA TGCTCGCCCG CCCTCTCCGC 
TCCGCGCTGA CCACGCTCGG CACCGTCCTC GGCATCACCA CCCTGGTCAT CACCCTGGGC
GTCGCCGCCA CCGCCGGGAA CCAGATCGTC GGCCGGTTCG ACGAGCTGAC CGCCACCGCG
ATCACCGTCG AGGTCCCCGA GAAGGCCGAC CCGCTGGTCA CCTGGGACGC CCCGGCCGCC
CTCACCCGGC TGCGCGGGGT CACCTCGGCC GCCGCGCTCG CCCAGACCGA TGAGAGCTCC
AACCTCCAAG TTGCCTCCAA CACCCTGGTG GACCCGGCCA GGGTCACCAA CCAGACCCTG
GCCGTGGTGG CCGGCGGGCC CGAGCTCCCG CAGGCGGTCC GCGGCCGGAT GACCGAGGGC
CGCTTCTTCG ACGCCGGCCA CGTCGAGCGC CGCGACCGCG TGGTGGTCCT CGGCGACCAG
GCCGCCAGGA TGCTCGGCGT CACCCGTCTG ACGAGCGCCC CCGCCGTCTT CATCGAGGAC
CGCGCCTACA CGGTGATCGG CATCCTGGGC GGCCTGCGCC GCGAGCAGAT CCTGTCCACC
GCCGTGATCG TGCCGCCCAC GCTCGGCGCC GACTTCGGCC TGAAGAACGT CACCCGCGTC
CTGGTCAACA CCACCCTCGG CGCCGCCGAC CTGATCGCCG GTCAGGCCCC CGTCGCGCTG
AGCCCCAACC ATCCGGACGC ACTCCAGGTG ATCGCCCCGC CCAGTCCCAC GCGCGCCCGC
GACGGCGTCC AGGACGACGT CAACGGCCTG TTCCTGATCC TCGGCATGGT GTCCCTGGTG
GTCGGCGCGA TCGGCATCGC CAACGTCACG CTGGTGACCG TGATGGAACG CGTCGCCGAG
ATCGGCCTGC GCCGCTCGCT GGGCGCCGCC CGCCGCCACA TCGCCGCCCA GTTCCTGCTG
GAGTCCACCC TGATCGGCAT GACGGGCGGC GTGATCGGCG CCGGCCTCGG CCTGGTCTCC
GTCGTCGCCA TCTCCGCCGC CAAGGAGTGG ACCCCCGTCC TCGACGCCCG CCTCGCCCTG
GCGGCTCCCG TCGCCGGCGC CCTGGTAGGC CTCCTGGCGG GCCTCTATCC GTCGCTGCGA
GCCGCCCGCA TGGAACCCGT GGACGCCCTG CGGTGA
 
Protein sequence
MDIRDLWAEA LAGMLARPLR SALTTLGTVL GITTLVITLG VAATAGNQIV GRFDELTATA 
ITVEVPEKAD PLVTWDAPAA LTRLRGVTSA AALAQTDESS NLQVASNTLV DPARVTNQTL
AVVAGGPELP QAVRGRMTEG RFFDAGHVER RDRVVVLGDQ AARMLGVTRL TSAPAVFIED
RAYTVIGILG GLRREQILST AVIVPPTLGA DFGLKNVTRV LVNTTLGAAD LIAGQAPVAL
SPNHPDALQV IAPPSPTRAR DGVQDDVNGL FLILGMVSLV VGAIGIANVT LVTVMERVAE
IGLRRSLGAA RRHIAAQFLL ESTLIGMTGG VIGAGLGLVS VVAISAAKEW TPVLDARLAL
AAPVAGALVG LLAGLYPSLR AARMEPVDAL R