| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8533 |
|---|
| Symbol | |
|---|
| ID | 8671867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9414423 |
|---|
| End bp | 9415022 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003343918 |
|---|
| Protein GI | 271969722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00958176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAC CTCCGCGCGC TGAGGGCCTG CGCGAACGCA AGAAGGCCAA GACTCGGCGG
ACGATCCAGG AGCACGCCCT GCGGTTGTTC GCCGAGCAGG GGTACGAGGC CACGACGGTC
GAGCAGATCG CGGAGGCGGC GGAGATCTCC CCCAGCACCT TCTTCCGTTA CTTCCCCGCG
AAGGAGGACG CCGTCCTCCA GGACGACTAC GCCCCCGTCC TGACGGCGAT GCTGGCCGCG
CAGCCGGCGG ACCTGGAGCC GGTCCCGGCG CTGCGCGCCG CCGTGCGCGG AGCGTTCGAG
CGGTTCCCCC GGGAGGAGGA GCCGCAGATC CTCGCCCGCA CCCGGCTGCA GCTCAGCCAT
GCCGCCCTGC GCGCCAAGAC CGTGGACAAC ATGATCGGCA CGATCGACAT GCTCGCCGAG
GGCGTCGCCC GGCGCCGGGG GCTCGACGCC CCCGACGCGC TGAGCCTCAC GACCGCCGGA
GCCGTGGTGG GCGCGCTGCT CCCGGCCCTG TTCGGCTGGG CCCGGTCCGA CGGCGCCAGA
CGGCTGGCCG ACGTCACCGA CGAGGCCCTG GCCCTCCTGG AGTCGGGCCT GCGCCCCTGA
|
|---|
| Protein sequence | MSSPPRAEGL RERKKAKTRR TIQEHALRLF AEQGYEATTV EQIAEAAEIS PSTFFRYFPA
KEDAVLQDDY APVLTAMLAA QPADLEPVPA LRAAVRGAFE RFPREEEPQI LARTRLQLSH
AALRAKTVDN MIGTIDMLAE GVARRRGLDA PDALSLTTAG AVVGALLPAL FGWARSDGAR
RLADVTDEAL ALLESGLRP
|
|---|
| |