Gene Sros_8442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8442 
Symbol 
ID8671776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9313158 
End bp9314537 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content71% 
IMG OID 
ProductCysteine--tRNA ligase 
Protein accessionYP_003343829 
Protein GI271969633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGGC TGTATGACAC ACGGAACCGC CAGGTCGGAC CGGTCCTCCC CGAAGGGGCC 
CGGTCCATGC GGATGTACAC CTGCGGGCCC ACCGTCTACC GCTACGCCCA TGTCGGCAAT
TTCCGGTCGT ACGTGCTGGC GGACCTGATC AGACGGGTCA GCGAGCGGCA GCGGATCCGG
GTGGTCGCCT GCCGGAACAT CACCGACGTC GGGCATCTGG TGGACGACGC CGAGATCGAC
CCCGCCGGTG AGGACAAGAT CCTGCTCCAG GCGCGGGCCG AGGGACGGAC CGGGCTGGAG
ATCGCGCGGT TCTACGAGGC GGCCTTCCTG TCCGACACCG CCACGCTGAA CATCCGGCCG
CCCGAGCACT CCCCCAGGGC CACCGAGACG ATCGACCTGA TGATCGAGAT GATCGCCAAG
CTGATCGAGA AGGGGCACGC CTACCCCACC CCCGACGGGT CGGTCTTCTT CGACGCGGCC
TCCTTCCCGA CCTACGGCGA GATCTCCGGC AACCGGCTCG ACCGGCTGAA GCCCGGCCAC
CGGCTCGAAG GCGTCGATCC CCGCAAGCGG TTCCACGCCG ACTGGGCCCT GTGGAAGCCC
TCGGACCGCG AGATGACCTG GGAGGCCCCC TGGGGCCGCG GCTTCCCCGG CTGGCACATC
GAGTGCTCGG CCATGTCCCT GCGGTTCCTC GGCGAGCACA TCGACGTGCA CACCGGCGGG
ATCGACCTGC GCTTCCCGCA CCACGAGGAC GAGCGCGCCC AGTCCGACGC CACCGCCGGT
CACGAGGTGG TCAGGCACTG GGTCCACGGG GAGCACCTGC TGTTCGACGG GCGCAAGATG
GCCAAGTCCA CCGGCAACGT GGTGCTGCTC CAGGACGTGG TGGACGCGGG CCTGGATCCG
CTGGCCGTAC GGCTGGCGCT GCTGGAGCAC CGTTACCGCC AGCAGATGAA CCTCACCTGG
GACACGCTCC GGGCCGCCGA CAGGACCCTG CGGCGCTGGC GCTCCCACGT CGCCGAGTGG
TCGGAGACGC CGAGCCGCCC GATGCCCGCC GAGCGGGTCT CGCGGATCGA GGCCGCCTTC
GACGACGACC TCGACACCCC GCTGGCCCTG CGGCTCATGC GGGAGCTGGA ACGCGACGAC
TCGATCGCGC CCGGCTCCCG GTTCGAGGCG TTCCTGCACC TGGACCAGAT CCTCGGGCTG
GACCTGTCGA TCGACATCGG CAGGTCCAGG AGCCTGCCGC CGGGCGCCGC CGACCTGCTG
GAGCGGCGCC TGCGGGCACG CGCCGCCAGG GACTGGGCCG TCTCCGACCG GCTCCGCGAC
GAGCTGGCCA CCATGGGTGT GCAGGTCACC GACACCCCCG AGGGCCAGAC CTGGTCGTAG
 
Protein sequence
MLRLYDTRNR QVGPVLPEGA RSMRMYTCGP TVYRYAHVGN FRSYVLADLI RRVSERQRIR 
VVACRNITDV GHLVDDAEID PAGEDKILLQ ARAEGRTGLE IARFYEAAFL SDTATLNIRP
PEHSPRATET IDLMIEMIAK LIEKGHAYPT PDGSVFFDAA SFPTYGEISG NRLDRLKPGH
RLEGVDPRKR FHADWALWKP SDREMTWEAP WGRGFPGWHI ECSAMSLRFL GEHIDVHTGG
IDLRFPHHED ERAQSDATAG HEVVRHWVHG EHLLFDGRKM AKSTGNVVLL QDVVDAGLDP
LAVRLALLEH RYRQQMNLTW DTLRAADRTL RRWRSHVAEW SETPSRPMPA ERVSRIEAAF
DDDLDTPLAL RLMRELERDD SIAPGSRFEA FLHLDQILGL DLSIDIGRSR SLPPGAADLL
ERRLRARAAR DWAVSDRLRD ELATMGVQVT DTPEGQTWS