Gene Sros_8439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8439 
Symbol 
ID8671773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9306947 
End bp9309181 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343826 
Protein GI271969630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCT GTCTGAGTGA CCTCGTGCCG CCGCTGCGCT GGAGCGACGC GGCCACGATC 
CCACTCCTGC GCGACCAGCC CGACCTCCCG GACGCCTGGT GGCGCAGCCT GCCGATGGCC
CGGGTGCTCG CCGTGCTGGA CCCGGACGAG CTGGCCGAGA TCCTGGCCCG GATCGCCCTG
GAGCACTGGC CGGCCGCCGC CGTGGGCGAC GTGCTCCCCG CCCTGTACGT CCTGGATCCC
GACGAGGCCG ACGAGCCCTG CACGGCCATC GCCCTCGACC GTACCGGCTC CTGGTCCGGC
CTCCTCTCCC TCACCGGCCA CCAGCTGCGC GACCAGCCGT TCATCCAGCC CTTCCCCGTG
CTGAACGTCC TGTTCTCGGC GGTCTTCCAC CGGATGGCCC ATCCCGGGGC CGGACCGGGC
CCCGGGTTCC CGGAGATGGC GCCCGCCGCG GTCGATTCCA GGACCGCGTC GATGGCCGTG
GACCGCGAGA GCCCGGCCGG GGCGGGAGCG CGTGAAGCGG CCTTCGGGCT CGCGGCCGCG
GCCGCCGCCG TCGCGGCGCG TCCGGAGACG CCGTCCCAGG CCGCCGTGCC GGGGGCCGTC
GTGGGCGGGC CCGAGGCGCC GTTCCGGGCG GTGCCGGAGT GGCCGGACGC CGCTCCCCGG
CCGGACGCCG CTCCCGCCGC TGTCGCCGTA CCCCAGCCGG ACATCGCTCC CGCCGCCGGG
GCGGTCCCTG CCGAGCCCGC CGGGTCCGGC CCGGAGACCG GCCCCGGGCC GGGCGCGGGA
ACCGACCCGC GGGACAGCCC GCAGAACGGC CCGGGAGACG GCTCCGAGGA CGCTTCCGCC
GGCCCGGAGC CCCTGCCCGG CCCGGACGCC GGGGCGGCAC CGGCCGCGGC CGTACCCGCC
GCACGGGCCG CGCTGGAGGC CGAGGCGGCG AGCGGCGCGG ACGACGAGGA GGCCCGGTGG
CCCGCCGAGA GCGTTCACGC GCTGGTGGAC GGCGCCTTCG CCAACCTGGA GGACAAGAGC
TGGGCCATCG CGCAGAACAG GCTGTTCAGC GACGAACCGG CGACCGTGGA GGCGCTGGCC
AAGCTCTTCG CGGTGCAGCC CGAGGTGATC CGCGAGCTGG AGGGCGACCT GCGCCTGCGG
TTCAGCGCGT GGCTCGGCTC GGACGAGGCC GCGCCGTACC GGGAGCATCT GGCCGAGGTC
AAGCGGGTCC TCGGCAAGGC CGCGCCCAAG ACGCGCCTGA TCACGGCCGC CGACTGGCAC
TCCCTTGAGC TCCACTCCCT CGACGTGCCC GCCTGGCAGT TCGTGCTGGC CAGCCTCCCC
GAATACCACC TGGTCGACGA GTGGCTGGTG GAGGGTGACA TCGTCGAGCT GCGCCACCAC
ACGCGTGACG TGATCAGCGG CGCCAAGCCG CCGCTGACGA TGACCAAGGC CCTCGCCCTG
GTCACCTCCC TCGGCATCCA CCCCGAGGTC TCGAAGGAGT GGCTGGAGAA CGTCCCCCAG
CTCCGCATCC TGGGCGCCGG CCAACGACCG CCCCAGCGGC CACCCCAGCG GGCGAACGGC
TCGGCGACCA AGGCCAAGGG AGCCGAGAGG GCCAAGAGCG CCGACCGGGC CGAGAAAGCG
GAGAAGGCCG AGAAGGCGGA GCGCGCCGAG AAGGCCGAGC GGCCGGTGGC CGACGCCCGC
GGCAAGGGAC CGGACGGGGA GCCCGGCAAG AGCCCGTTCC GGCCGCTCAA GGACGTCTCG
CTGACCCGGC GCTGCTTCCG GCAGCCGGAC GGCCGGTGGT GGCTCAGGAT CGACGTCACC
CCCGAGCACA TCCAGGGAGC CGAGTGCCCG CTGCCCAGCG GGTTCGCCGC CTACCTCGGC
ATGTCGCCCG GCGGCAGCCG TACGGTCAAC AGCGCGGTGG GCGAGCTCAC CCTGAGCTGG
CAGGAGCGGC CCGTCGTGGA ATCGCTCAGG ACGCTCCTCA CGGACGTGGG CGCCAAGCAG
GGGAGTTACC TGTTCCTGAC GCTGTCCGAC GAGGGGGTGC TGCGTGCCAG GCACCTGCCG
GCCGCGGGCA AGGGGGTCGA GGCGACGGCG CAGGCGCTGC GGCTGGTCGG CTACACCGCG
CCGGGCGGCA CCCCGGAGCA GGCCGGCCGG GTCATCGCCA CCCGGGTCGG CATGACCGGC
CAGGTGAGCC TGCCTGACCT CCTCAGCCGG CTGCGAGAGC GCGGGGACCG CGACCTGCTG
TCCCTGCTGG CCTAG
 
Protein sequence
MNFCLSDLVP PLRWSDAATI PLLRDQPDLP DAWWRSLPMA RVLAVLDPDE LAEILARIAL 
EHWPAAAVGD VLPALYVLDP DEADEPCTAI ALDRTGSWSG LLSLTGHQLR DQPFIQPFPV
LNVLFSAVFH RMAHPGAGPG PGFPEMAPAA VDSRTASMAV DRESPAGAGA REAAFGLAAA
AAAVAARPET PSQAAVPGAV VGGPEAPFRA VPEWPDAAPR PDAAPAAVAV PQPDIAPAAG
AVPAEPAGSG PETGPGPGAG TDPRDSPQNG PGDGSEDASA GPEPLPGPDA GAAPAAAVPA
ARAALEAEAA SGADDEEARW PAESVHALVD GAFANLEDKS WAIAQNRLFS DEPATVEALA
KLFAVQPEVI RELEGDLRLR FSAWLGSDEA APYREHLAEV KRVLGKAAPK TRLITAADWH
SLELHSLDVP AWQFVLASLP EYHLVDEWLV EGDIVELRHH TRDVISGAKP PLTMTKALAL
VTSLGIHPEV SKEWLENVPQ LRILGAGQRP PQRPPQRANG SATKAKGAER AKSADRAEKA
EKAEKAERAE KAERPVADAR GKGPDGEPGK SPFRPLKDVS LTRRCFRQPD GRWWLRIDVT
PEHIQGAECP LPSGFAAYLG MSPGGSRTVN SAVGELTLSW QERPVVESLR TLLTDVGAKQ
GSYLFLTLSD EGVLRARHLP AAGKGVEATA QALRLVGYTA PGGTPEQAGR VIATRVGMTG
QVSLPDLLSR LRERGDRDLL SLLA