Gene Sros_8415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8415 
Symbol 
ID8671749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9287491 
End bp9288030 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003343803 
Protein GI271969607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0624926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATC TCGGAGAGCG TGTTTCCGCA CTGGTCGATG GTGAGCTGAA CCACCATGAG 
CGCGACCGCG CCCTGTCTCA TCTGACCTTC TGCGCCGCCT GCCGGGCCGA GGTCGATGCC
ATGCGGGCTT TGAAGAACCG GTTGCGATCC CTGGACGGGC CCGCCATGCC CGCCGACCTG
ACCATGTCGT TGCTGCGGAT GTCCGAGCCC GGCGGCCCGT TACCGCCGCG TGAGCGGCCT
TTCCCGACCT CCTCGGCCTC GCGGACGTTC GGCGGTGCGC CGATCCCGAG CATGCACAGC
GTGGCGCCGC CGGACAACCG GCCGCGCGGC CGTGCCGGAG GTCCCCGCCG GGCGAGAAGG
GCGGGTTACG TCGCGGTGGG CGTCGCCTCC GCGGCCGTGG CGCTCGGCAC GCTGTTCGTC
GCGGGCGGCT CCGGCCCCAG CCCGCGTGTC GTGCCGCCGG TCGACATGTT CGCCAACCAG
CACAGGAACA CCGCGCCCTA CGGAGGGTCG GCGACGCCGA CCTTCTCCCC CACTCCGTGA
 
Protein sequence
MSHLGERVSA LVDGELNHHE RDRALSHLTF CAACRAEVDA MRALKNRLRS LDGPAMPADL 
TMSLLRMSEP GGPLPPRERP FPTSSASRTF GGAPIPSMHS VAPPDNRPRG RAGGPRRARR
AGYVAVGVAS AAVALGTLFV AGGSGPSPRV VPPVDMFANQ HRNTAPYGGS ATPTFSPTP