Gene Sros_8344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8344 
Symbol 
ID8671678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9211696 
End bp9212742 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343735 
Protein GI271969539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.258023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC GAGCGCTGAC CTTGATGGTG GCCGGCTTCC TCACGCTCAT GCTCGGCGTC 
GTCGGCGCCC TGCTGCCGGT TCCGTACGTC GTCCTGAGCC CAGGACCGAC CGAGAACACC
ATCGGCGACG TCAAGGGCAA GCCGGTGATC AGCATCGAGG GACACCCGAC CTACCCGACC
TCCGGCAAGC TCAGCCTCGT CACCGTGGCC TACCAGGGGG GACCGGGCAA CAGGATCGAC
CTGTTCAGCG CGCTCAGAGG CTGGGTCGAC CCGACCGTCG CGGTCGTGCC GGAAGAGACG
ATCTTCCCGC CGACGAGCAC GGCGGAGGAG GTCGAGCAGC AGAACACCCA GGAGATGACC
AACTCCCAGG ATGACGCGAC CGCGGCGGCG CTGACCGAGT TGAAGATCCC CTACACCTCG
GTCGTGAGCG TGGCCTCCGT TCAGAAGGGC CTGCCGGCCG ACGGGAAGTT CAAGGCCGGC
GACGAGATCG TCTCGGTGGA CGGGACGCCC GCGGCCGACC GCGAGACCGT CTCCGCGGCC
GTCCGCAAGC ACAAGGCCGG CGAGAAGGTC AGCTTCACCG TCAACCGCGG CGAGCAGAGC
AGGACCGTGG CCGTCCCGAC CGCCGCGGCC AAGGACGGCA CGCCCATCGT GGGCATCACC
ATGCAGATCA GATACAAGTT CCCGTTCAAG GTGAAGATCA ACGTCGGTGA CGTCGGCGGG
CCGAGCGCGG GGATGATGTT CTCCCTCGGC ATCATGGACA AGCTCACCCC GGGGGCGATG
ACCGGGGGCA AGGCGGTCGC CGGGACCGGG ACGATCACCC CGGAGGGCAG GGTCGGCCCG
ATCGGCGGCA TCCAGCAGAA GATGGTGGGC GCCCGCAAGG CCGGGGCCAC GGTCTTCCTC
ACCCCGGCCG AAAACTGCGC CGAGGCGACG AAGGCCATCC CCGACGGCCT CAAGCTGGTC
AAGATCGAAA CGCTGCACGA CGCGGTGAAG GCGATCGACG TGGTCCGCAC CGGCTCCGGC
ACCGCGCCGA GCTGCCCCGT CGGTTGA
 
Protein sequence
MSRRALTLMV AGFLTLMLGV VGALLPVPYV VLSPGPTENT IGDVKGKPVI SIEGHPTYPT 
SGKLSLVTVA YQGGPGNRID LFSALRGWVD PTVAVVPEET IFPPTSTAEE VEQQNTQEMT
NSQDDATAAA LTELKIPYTS VVSVASVQKG LPADGKFKAG DEIVSVDGTP AADRETVSAA
VRKHKAGEKV SFTVNRGEQS RTVAVPTAAA KDGTPIVGIT MQIRYKFPFK VKINVGDVGG
PSAGMMFSLG IMDKLTPGAM TGGKAVAGTG TITPEGRVGP IGGIQQKMVG ARKAGATVFL
TPAENCAEAT KAIPDGLKLV KIETLHDAVK AIDVVRTGSG TAPSCPVG