Gene Sros_8242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8242 
Symbol 
ID8671570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9095955 
End bp9097361 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content77% 
IMG OID 
Productxylulokinase 
Protein accessionYP_003343634 
Protein GI271969438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.25977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG GAGTCGACGC CGGGACGTCC GGGGTCAAGG CGGTGGCCTT CGCGCCGGAC 
GGCGAGGTGC TGGCGGTCGA GTCGCGGCCG CTCGCGCTCG GCCATCCGGG CCCCGGCCAG
GTGGAGCAGG ACGCGGAGGC GGTGGTCGCG GCCGTCGAGG ACGTCCTCGG CCGGCTCGCG
GCCGGCGGCG TCCGGACCGG CGAGGTCCGG GCCGCCGGGC TCACCGGCCA GGGAGACGGG
CTCTGGCTGC TCGACGGGGA GGGAAGGCCC ACCGGGCCCG CCCTGTCCTG GCTGGACGGC
CGCGCCACCC CACTGGTCGA CGGCTGGATG CGCGACGGCA CGTTCGAGGA GCTCTTCCGG
CGCACCGGCA ACGCCGCCTT CCCCGGCTCG GGCGCCCCCC TGCTCGCCCA CCTCGACCGC
ACCAGCCCCG CGACGCTGGA CCGGGCGGCC ACCGCCGCGC GCTGCAAGGA CATGATCATG
CAGCGGTTCA CCGGGGTGCG CGCCACGGAC CTGTCCGACG CCTCCAACCT CTTCACCGAT
CCGCGGACGC GGGAGCGCGA CGCCGGACTC CTCCGCCTGT GCGGCCTGGA GCACCGGCGG
GGGCTGCTGC CCCCCGTCGC GGCGGAGCTG CCGGCCGGGG AGATCCTGCG GGGCGCCTTC
AGGGGCGTCC CGCTCTCCGC CGGGCCGTAC GACCTGCCGG CCTGCGCCGC CGGGGCGGGT
GTCGTCCGGC CGGGCGACGG ACTGCTGATC ATCGGGACCA CGCTCGCCTG CGAGGTGGTC
ACCGACCGTC TCGACCTCGA CGGGGAGCCC GCGGGCCAGA CCCTCTGCAC GCCGGACGGC
TGGCTGCGGG CGATGCCCGC CATGACCGGC ACCGCGGCGC TCGACTGGCT GCTCCGCCTG
GTCGGCGCCG GGCACGGCGA GCTCGGCGAC CTCCTCGCCC AGAGCCCGCC GGGCGCGCGG
GGCGTGCGCT TCCTGCCCTA CCTGTCGCCG TCGGGCGAGC GTGCGCCGTT CGTCGAGCCG
GCGGCGCGGG GCAGGCTCGA CGGCCTGGAA CTGGCCGTGA CCAAGGCCGA CGTCGTCCGC
GCCGGGTGCG AGGGCCTGGC GTTCGCGGCC AGGCACTGCT TCGAGGCGGC GGGACTCACC
GGGGAGGTGG CCGTCTGCGG CGGCGGCACC GGCTCGGAGG CCTGGCTGCA ACTGTTCGCC
GACGCGCTGG GGCGCCCGCT CCGGCTGGCC AGGGGGCCCG AGGTGGGCGC GAGGGGCGCG
GCGCTGGCCG CCGCCCGCCG GTTCGGCGTC GCCGTGGACG AGGCCGCCTG GACCGCGGGC
ACCCGCTGGT ACGAGCCCCG CCACGACCTG GAGGAGCACT ACCTCCGCTA TCTCGACGAC
GTGCGAAGCC TGAGAAGTTC CCTGTGA
 
Protein sequence
MIVGVDAGTS GVKAVAFAPD GEVLAVESRP LALGHPGPGQ VEQDAEAVVA AVEDVLGRLA 
AGGVRTGEVR AAGLTGQGDG LWLLDGEGRP TGPALSWLDG RATPLVDGWM RDGTFEELFR
RTGNAAFPGS GAPLLAHLDR TSPATLDRAA TAARCKDMIM QRFTGVRATD LSDASNLFTD
PRTRERDAGL LRLCGLEHRR GLLPPVAAEL PAGEILRGAF RGVPLSAGPY DLPACAAGAG
VVRPGDGLLI IGTTLACEVV TDRLDLDGEP AGQTLCTPDG WLRAMPAMTG TAALDWLLRL
VGAGHGELGD LLAQSPPGAR GVRFLPYLSP SGERAPFVEP AARGRLDGLE LAVTKADVVR
AGCEGLAFAA RHCFEAAGLT GEVAVCGGGT GSEAWLQLFA DALGRPLRLA RGPEVGARGA
ALAAARRFGV AVDEAAWTAG TRWYEPRHDL EEHYLRYLDD VRSLRSSL