Gene Sros_8189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8189 
Symbol 
ID8671517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9035253 
End bp9036431 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003343583 
Protein GI271969387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTCC TTGACCTGTG GGCAGAGTCC CTGGCCGGGA TGCTCGCCCG TCCGATGCGC 
TCGGCCCTGA CCACTCTCGG CACCGTCCTG GGCATCACCA CGCTGGTGGT CACCCTGGGC
ATCGCGGCGA CCGCGGGTAA CCAGATCGTC GGTCGCTTCG ACGAGCTGCT GGCCACCAGC
ATCACCGTCG AGGTGCCCCG AGGCGGCCAC AACCCTCTGG TCACCTGGGG GGCGGCCAAA
GAGCTGCGAG GCCTGCGCGG CGTGACGTCG GCGACGGCGC TGGCGCAGAG CGACGACAGC
TCCAACCTCG TCGTGACCGC CAACAACCTG CTCGACCCGA CCCGAGTGGC CGGGCAGACC
CTCGCGGTCG TCGCGGCCAC CCCCGACCTG CCGGAGACCA CCCGTGGCCG GATGGTGGCC
GGGCGGTTCT ACGACGCCGG CCACGTGGCC CGCCACGACC GGGTGGTCGT GCTGGGCGAG
CAGGCCGCCG AGATGCTCGG GATCACCAGC CTGGAGCACT CGCCGGCGGT GTTCATCAAG
GACCGGGCCT ATACGGTCAT CGGCATTGTC GGCGGCCTGC GGCGCGAGCA GATCCTGTCC
AGCGCGGTGC TCGTCCCGCC TGGCCTGGGT CCCGATTTCG GCCTGAAGGA CGTCACCCGT
GTCCTGGTCG CCACCCAGCT GGGCGCCGCC GAGCTCATCG CCCGCCAGGC GCCGCTCGCG
CTCAGCCCCG ACCGCAGCGG GGAACTGCAG GTGATCGCCC CGCCCAGTCC CAAGCGGGCG
CGGGACGGCG CCCAGGACGA CGTCAACGGC CTTTTTCTCG TCCTCGGCCT GGTCTCCCTG
GTCGTCGGCG CGGTGGGCAT CGCGAACGTC ACCCTGGTCA CGGTCATGGA GCGGGTCTCC
GAGATCGGCC TGCGCCGCGC GCTGGGCGCA GCCCGCCGGC ACATCGCCGC CCAGTTCCTG
CTGGAGTCCA GCCTGATCGG GCTGACCGGC GGGGTGATCG GGGCCAGCCT GGGGATGGTG
GCTGTGGTCG CGGTGGCGGC CGTGCGGCAG TGGACCCCGG TCCTCGACGT ACGGCTGGCG
CTGGTCGCGC CGGTGGCGGG TGCGCTGGTG GGGCTCCTGG CGGGCCTGTA TCCGGCGCTG
CGCGCGGCCC GCATGGAGCC GGTCGACGCG CTGCGATGA
 
Protein sequence
MKLLDLWAES LAGMLARPMR SALTTLGTVL GITTLVVTLG IAATAGNQIV GRFDELLATS 
ITVEVPRGGH NPLVTWGAAK ELRGLRGVTS ATALAQSDDS SNLVVTANNL LDPTRVAGQT
LAVVAATPDL PETTRGRMVA GRFYDAGHVA RHDRVVVLGE QAAEMLGITS LEHSPAVFIK
DRAYTVIGIV GGLRREQILS SAVLVPPGLG PDFGLKDVTR VLVATQLGAA ELIARQAPLA
LSPDRSGELQ VIAPPSPKRA RDGAQDDVNG LFLVLGLVSL VVGAVGIANV TLVTVMERVS
EIGLRRALGA ARRHIAAQFL LESSLIGLTG GVIGASLGMV AVVAVAAVRQ WTPVLDVRLA
LVAPVAGALV GLLAGLYPAL RAARMEPVDA LR