| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8188 |
|---|
| Symbol | |
|---|
| ID | 8671516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9034589 |
|---|
| End bp | 9035266 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003343582 |
|---|
| Protein GI | 271969386 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.611714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC CCGTCATCGA GCTGGCCGGC GTGTGCCGTG ACTTCCCCTC CGAGCCGCCG
GTGCGCGCGC TGGCCGACGT GGAGCTGCGG GTCGATCCGG GCGACTACGT GGCCATCGTC
GGGCCGTCCG GCTCCGGCAA GTCCACCCTG CTCAACATCC TCGGACTGCT GGACCGGCCG
ACCTCCGGCT CCTACCGCCT GGACGGCGTC GAGACCACGG CGCTGCGCGA CGGCGCGCGG
ACCCGGCTGC GCGGTACCCG TATCGGTTTC GTCTTCCAGT CCTTCCACCT GCTGCCCCAC
CGGACGGTCG TGGAGAATGT GATGCTCGCC GAGGTGTACG GCCCGCACCC GCGCACCGGC
CGGCGGGCCC GTGCCGAGCG GGCGCTGGCG CAGGTGGGCA TGAGCCATCG CGTCGGCTTC
GGCCCCGACC GGCTGTCGGG CGGCGAGCGC CAGCGCGTGG CCATCGCCCG CGCGCTGATG
GCCAAGCCCG CCCTGCTGCT GTGCGATGAG CCGACCGGCA ACCTCGACAG CCGCAACACC
GAGGCCATCC TCGATCTGTT CGAGGGCCTG CGCGCCGAGG GCCTGACCAT CCTGGTGATC
ACGCACGAGG ACGAGGTGAG CGCCAGGGCC AAACGGCGGG TCCGGATCGC GGACGGGGCG
CTCAGTGAAG CTCCTTGA
|
|---|
| Protein sequence | MSEPVIELAG VCRDFPSEPP VRALADVELR VDPGDYVAIV GPSGSGKSTL LNILGLLDRP
TSGSYRLDGV ETTALRDGAR TRLRGTRIGF VFQSFHLLPH RTVVENVMLA EVYGPHPRTG
RRARAERALA QVGMSHRVGF GPDRLSGGER QRVAIARALM AKPALLLCDE PTGNLDSRNT
EAILDLFEGL RAEGLTILVI THEDEVSARA KRRVRIADGA LSEAP
|
|---|
| |