Gene Sros_8180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8180 
Symbol 
ID8671508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9022407 
End bp9023069 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter membrane spanning protein (proline/glycine/betaine) 
Protein accessionYP_003343574 
Protein GI271969378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGAGG AACCGCTGGT CCGCTGGGAC TGGATCGGGC GCAACTGGCC CTCCATCCAG 
GTCCTGCTGG AGGACCACGT CGTCATGGCG CTGGTGCCGA TCGTCATCGG GCTGCTCGTC
GCGCTCCCGC TCGGGCTGGC CGGCGTCCGC TGGCGCTGGC TCTACCAGCC GACCGTCGGC
GTCATGAACG TGATCTACTC GCTGCCCTCG CTGGCGGTCT TCATCGTGCT CATCCCGGTC
ACCGGCCTCG CCACCCGGAC GACGGTGATG GTCCCGCTCA CGTTCTACGC CATGGCGGTG
CTGATCCCGG CCGTCGTGGA CGGCCTCACC TCGGTCCCCG ACCATGTGCG CCAGTCGGCG
GTGGCCATGG GCTTCACCCC GCTGCGGCGG CTGCTCCAGG TGGAGCTGCC GATCGCGGTC
CCGGTCGTGC TGGCCGGGCT CAGGGTGGCC GCGGTCTCCA GCATCAGCCT GGTCAGCGTG
GGTGCCCTGG TCGGCCGGGG CGGGCTGGGC TACCTGTTCA TCGACGGCTG GCAGCGGCAG
TTCTACACCC CGATCATCGT GGGCATCGTG CTGGTCGTGG TGCTGGCGGC AATCGCCGAC
CTGCTGCTGG TCCTGGCGCA GCGCCTGCTG ACCCCGTGGT CGCGGGCAAG GGGGGCCGCG
TGA
 
Protein sequence
MHEEPLVRWD WIGRNWPSIQ VLLEDHVVMA LVPIVIGLLV ALPLGLAGVR WRWLYQPTVG 
VMNVIYSLPS LAVFIVLIPV TGLATRTTVM VPLTFYAMAV LIPAVVDGLT SVPDHVRQSA
VAMGFTPLRR LLQVELPIAV PVVLAGLRVA AVSSISLVSV GALVGRGGLG YLFIDGWQRQ
FYTPIIVGIV LVVVLAAIAD LLLVLAQRLL TPWSRARGAA