| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8107 |
|---|
| Symbol | |
|---|
| ID | 8671435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8932847 |
|---|
| End bp | 8933488 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Zn-dependent hydrolase of the beta-lactamase fold-like protein |
|---|
| Protein accession | YP_003343505 |
|---|
| Protein GI | 271969309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.880761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CGAAGTTCGG ACACGCGTGC GTCCGCCTGG AGAAGGACGG CTCGGTCCTG
GTGATCGACC CGGGCTCCTT CAGCGAGGAG TCCGCGCTGG ACGGGGCGCA GACCGTCCTC
ATCACCCACG AGCACTTCGA CCACGTGGAG GCCGACCGGC TGCGCCGGGC CGCCGAGGCC
AACCCGTCAC TGGAGATCTG GACCAACGAG GGCGTGGCCG CCACGCTGAC CGGTGTCCCG
GCGAAGATCC AGGTCGTACG GCACGGCGAC ACGTTCGACA CGGCGGGTTT CGGGGTGCGG
GTCGTCGGCG AGTGGCACGC CCCCAACCAC CCGGACATGC CGATCGTGCG CAACGTCGGC
TTCCTGGTGG AGGAGGAGGT CTTCTACCCG GGTGACGCCT TCACCCCGCC CGGCGTCGAG
GTACCCACGC TCCTGGTGCC GACCAACGCG CCGTGGATGA AGGCGTCGGA GATGGTGGAA
TACCTGCGCC AGGTCCGCCC GGCCAGGGCC TTCTCCACCC ACGACGGTCT GCTCAACGAC
ATCGGCCTCG GCCTCGTCGA CTCGTGGCTG GGCCTGGAGT CGGACAGGCA GAAGGCCGAG
ATGCGCCGCC TGAAGCCGGG CGAGTCGGTC ACCCTGCCCT AG
|
|---|
| Protein sequence | MKLTKFGHAC VRLEKDGSVL VIDPGSFSEE SALDGAQTVL ITHEHFDHVE ADRLRRAAEA
NPSLEIWTNE GVAATLTGVP AKIQVVRHGD TFDTAGFGVR VVGEWHAPNH PDMPIVRNVG
FLVEEEVFYP GDAFTPPGVE VPTLLVPTNA PWMKASEMVE YLRQVRPARA FSTHDGLLND
IGLGLVDSWL GLESDRQKAE MRRLKPGESV TLP
|
|---|
| |