Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8044 |
Symbol | |
ID | 8671372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8854567 |
End bp | 8855316 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003343442 |
Protein GI | 271969246 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.467604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGCCG ACGAATCGCC GCTCCCCTCG GTGTGGACCC GGCCGCGCAG GCAACGGCGC GAACAGCCGG CGCTGAGCCG GGAGCAGATC GTGTCCGAGG CCCTCAAGCT GCTCGACGGC GAGGGGATCG ACGCCCTGAG CATGCGGCGC CTCGGTGGCC GGCTGGGCGC CGTGGCCACC GCGATCTACT GGCACGTGGC CAACAAGGAC GAGCTGATCG AACTGGTCGT GGACGAGGTC TACAGCGAAA TGCGGGTGCC GGACGTCGAA GATCCGGCCG ACTGGCGGGC GGCCGCCGTC GGCTGCGCCC GCAGCATGCG GTCGGTGATC CTCCGCCATC CCTGGATGGT CTCCGTGCTC GACGAGGTGG GGCTGGCCTA CCTGGGGCCG AACATGATGC GGCAGTCCGA CCGCATGCTC GCCGTGTTCG AGGCGGCGGG CTTCGCGCTG AGAGAGGCCG ACCAGGCCGT GCAGACGGTT GCCGCGTACG TCCTGGGGAC GGCGACCAGC GAAGCCGCGA TGCTCACGAA GCTCGCCGGT GGCGCCCGGA GCGAGCGGGA CGTGGTGGAG GACCTGTGGC CGGCCGCCGA GGCGGCCGCG CTGGCGTATC CGAGGCTGCG GGAGCTGTAC GCGACCTACC GGGGCGAGGA CCCGGAGAAG AACCGGGAGG AGACCTTCGC CTACGGGCTC GAGCGAGTCC TCGACGGCCT CCAGGCCCGC CTCGGCCCGG CGGGCGGTTC CGCCGGCTGA
|
Protein sequence | MSADESPLPS VWTRPRRQRR EQPALSREQI VSEALKLLDG EGIDALSMRR LGGRLGAVAT AIYWHVANKD ELIELVVDEV YSEMRVPDVE DPADWRAAAV GCARSMRSVI LRHPWMVSVL DEVGLAYLGP NMMRQSDRML AVFEAAGFAL READQAVQTV AAYVLGTATS EAAMLTKLAG GARSERDVVE DLWPAAEAAA LAYPRLRELY ATYRGEDPEK NREETFAYGL ERVLDGLQAR LGPAGGSAG
|
| |