Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8043 |
Symbol | |
ID | 8671371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 8853876 |
End bp | 8854508 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Cell wall-associated hydrolase (invasion- associated protein)-like protein |
Protein accession | YP_003343441 |
Protein GI | 271969245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.433259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGAA CCATCCTGTC CGGCAAGATT TACCCCCGCG TCCTGACCCT TCTCGTCGCC GGCACCACCG TGTTCGCGAC CCCGTCCCTC GCGCAGGCCG ACACTCCCGC CCCCGCCCCC TCCCCCGCCC CCTCGCCTGA GGCCACGACG CTCACCGGCC CCAAGCTCAA GGAGATCCTC GCCGAGCAGG CCCCCAAGCC CGCTTGGAAG AAGGCCCTGA AGTGGGCCAT GGCCCAGCGC GGCACCCCGT ACGTCTGGGG CGGCACCGGC CGCGGCGGCT TCGACTGCTC CGGCCTGATG CTCCGCGCCT ACGGCGCCGC CGGGATCAAG CTGCCCCGCG TCGCCGCCGA CCAGTACCGC GCGTTCTCCA AGAAGATCGC CTGGAAGAAC CTCAAGCCCG GCGACCTGGT CTTCTTCCAC GGCCTCGGCC ATGTCGGCAT GATCAGCAAG CCCGGCTACA TGGTGCACGC CCCGCAGAGC GGCGACGTGG TCAAGGAGGA GAAGCTCAAC GCCTGGCGCC GCAGCAGCTT CGTCGGCGGC GTCCGCCCCG ACCCCGCGGG CGTCAAGCTC TCCGTCGAGC AGGCCAAGCG CGCGGCCGAA CCCGCCCCCA CGATGCTCGA GGCCACCGCC TGA
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Protein sequence | MEGTILSGKI YPRVLTLLVA GTTVFATPSL AQADTPAPAP SPAPSPEATT LTGPKLKEIL AEQAPKPAWK KALKWAMAQR GTPYVWGGTG RGGFDCSGLM LRAYGAAGIK LPRVAADQYR AFSKKIAWKN LKPGDLVFFH GLGHVGMISK PGYMVHAPQS GDVVKEEKLN AWRRSSFVGG VRPDPAGVKL SVEQAKRAAE PAPTMLEATA
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