| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7893 |
|---|
| Symbol | |
|---|
| ID | 8671216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8702829 |
|---|
| End bp | 8704733 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003343294 |
|---|
| Protein GI | 271969098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGGCGCC TGCGGTACCG CTTCGACAAC CTCATCTCCC GGGGCGCCTG GACCATGATC
GGCCTGCTCG CCGTCGTGGC GCTGGTCATG GCGGCCGTCG GCGCGATGGC CATCCTCGCC
CTCTCCCCGC ACTCCATGGA CCTGCCCTCG GCCCTGTGGT CGGGCCTGAT GCGCACCATG
TCGCCGGGCA TGGTGGCCCG GGACATCGGT TCCCCGGTGT TCCTGACGAG CATGCTGGTC
CTCGCCCTGG CCGGAGTCGT GATCTTCAGC ACGCTCATCG GGCTGATCGA GACCGGGCTC
GACCGGAAGC TGGCCCGGCT GCGGAAAGGC CGCTCCCGGG TCATCGAACA CGACCACACC
GTCGTGCTCG GCTGGTCGGA GCAGGTGTTC CTGATCCTGT CGGAGCTCGC CGTCGCCAAC
GCCAGCCGGG GAAGGAGCTG CGTGGCGATC CTCGCCGACA TGGACCGGGT CACCATGGAG
GAGGCCATCA GGGAGAGGGC TGCCCTCCCC CGCCGCATGC GCGTCGTGTG CCGTACCGGA
AACCCCACCG ACCCGGTCGA CGTGGCCATC GTCAGCCCCG AGCGGGCACA CGCGGTCATC
GTGCTGGGGG CCGAGGACGG AGACTCCGAC GCCAGGACCG TCAAGACCCT CCTGGCCCTC
GACGCCGCGG GGGTGCGGCC GGAGGTCCAG CTGGTGGCGG GCGTCCGCGA CCCGCGCAAC
CTCGCGGCGG CCCGCCTGGC GGGCGGGGCG AACACGCAGG TCGTCGACGT CGGCGAGATC
GCCGCACGGA TCATGGTGCA GACCTGCCTG CATGCCGGTC TCTCCATGGT CTACAGCGAC
CTTCTCAGCT TCGAGGGGGA GGAGATCTAC TTCTGCCCGC CCGGGGAACT GGCCGGCAGG
AGGTTCGGCG ACGCCCTGAC GGCCCTGGAG AACTGCTCCC TCATCGGCCT GGAACAGGGC
GGGAAGGCTG TCCTCAACCC CGCCGGGGAG ACGCAGATCG GCGTGGGCGA CCGGCTCGTC
GTCATCGCGG ACGACGACGG CACCGCGCCG CTCCACACGT CCGCCGGGGT GGACCGGGAC
GCGATAGCCG TCACCGGCCG GGACGGACCC GCGGCGCGCC GCGTTTTGGT CCTCGGCTGG
AACGCCTGCG GGGCCGCGAT CGTCACGGAG TTCGACCACT ACATCCCACC GGGCTCGCAG
GTGACGGTGG TGGCCGACGA TCCCCGGGTG ACCTCCCAGG TGAGCAGCCT GTCGGCCCGG
CTGGGGAACC TGACCCTGAG CTACGCGACC GAGGACGTCA CGCGGCGCGA CACCCTCGAC
TCGCTGGGCC TGGGATCCTA CGACCATGTC CTGATCCTGG CCGGCGACCG GGTCGACGCC
CAGGTCGCCG ACTCGCGCAC GCTCCTCACC CTCCTCCACG TCAGGGACAT GAGCAGGGAC
AACGGCTGGC GGCACAGCCT GGTGACGGAG ATCGCCAGAG ACTGCGACAG GCGGCTCGTC
GAGGTCACCG AGGTCGACGA CTTCATCGTC AGCTCCAAGA TCACCAGCCT TCTGATGATC
CAGATCGCCG AGAACCCCCA CCGCTACGGG CTGTTCGCCG ACCTCTTCGA CGCCGGAGGC
CAGGAGATCT ACATCCGGCC CGCCGAGGAC TACGTGCGGC TGTCGGTCCC GGTCAACTAC
GCGACCGTGG TGGCGGCGGC GCGCGCGTAC GACGAGGTGG CGATCGGCTA TCGCGCCGCC
GGCGCGGCCA CCGGGACCGT CGGAGGCGGC ATCGTCCTGA ACCCGCCGAA GAGCACAGAC
CTCACGTTCC ACCCCGGCGA CGCGGTGATC GTGCTCGCCG ACGGCGCCCT CCACCCCGGG
CGGGGGCCCC ACCCGGCGGG AGCCCGCCGG GTCGAGCACG CCTGA
|
|---|
| Protein sequence | MRRLRYRFDN LISRGAWTMI GLLAVVALVM AAVGAMAILA LSPHSMDLPS ALWSGLMRTM
SPGMVARDIG SPVFLTSMLV LALAGVVIFS TLIGLIETGL DRKLARLRKG RSRVIEHDHT
VVLGWSEQVF LILSELAVAN ASRGRSCVAI LADMDRVTME EAIRERAALP RRMRVVCRTG
NPTDPVDVAI VSPERAHAVI VLGAEDGDSD ARTVKTLLAL DAAGVRPEVQ LVAGVRDPRN
LAAARLAGGA NTQVVDVGEI AARIMVQTCL HAGLSMVYSD LLSFEGEEIY FCPPGELAGR
RFGDALTALE NCSLIGLEQG GKAVLNPAGE TQIGVGDRLV VIADDDGTAP LHTSAGVDRD
AIAVTGRDGP AARRVLVLGW NACGAAIVTE FDHYIPPGSQ VTVVADDPRV TSQVSSLSAR
LGNLTLSYAT EDVTRRDTLD SLGLGSYDHV LILAGDRVDA QVADSRTLLT LLHVRDMSRD
NGWRHSLVTE IARDCDRRLV EVTEVDDFIV SSKITSLLMI QIAENPHRYG LFADLFDAGG
QEIYIRPAED YVRLSVPVNY ATVVAAARAY DEVAIGYRAA GAATGTVGGG IVLNPPKSTD
LTFHPGDAVI VLADGALHPG RGPHPAGARR VEHA
|
|---|
| |