Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7862 |
Symbol | |
ID | 8671185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8671332 |
End bp | 8672054 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003343267 |
Protein GI | 271969071 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0504045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGGG AGGCTGCCGA GCCCGCGGCA CCGCCGCGGG ACGCGCGGGC GGGGAGCCCC GAGGCGACGT CCCCCGGGGA GAGGACGGCG CTCCCCGGGG ACGCGGCGAC GTCCCTCAAG GGCGGGCGGA AGGGTACGGA TGGCGCGGAG GGGGAGGGGG CTCCGGTTCC CGCCCGGCGC CCGCGCCGCC ATGATCCGAA CAGGCGTGAC CGCATCATCG ACGTCACCAT CGACGTGATC GCCGAGCACG GGCTCGCCGG TACCGGCCAC CGCAGCGTGG CGGAGGCGGC CGACGTCCCC CTCGGCTCGA TGACCTACCA CTTCGCGAGC CTGGACGAGC TCGTCGAACT GGCCTTCTCC CGCTACGTGA GCGTCCTGGC CGACCGTTTC GACGCGCGCC TGGCCGCCGC CCCCGAGAGC GGGGACCTTG CCGCGATCGT CACCGACGTG ATCATGGTCG ACTTCCTGCG GGCCCGCCGT GACCTGGTGC TCGCCTACGA GCTCTACCTC GGCGCCGCCC GCAATCCCGC TCTGCGGGAG GTGACGCGGA CCTGGATGCG CCGGAGCAGG CGTGCCCTGG AACGGCTCAC CGATCCGGCG ACCGCCCGGG TCCTCGACGC CCTGCTGGAA GGACTCGTGC TGCACAATTT CCTCGCGACG GACCCCATGA CGCGCGAGGA GGTCCACCAG GCGGTCGCCC GCGTCATCGG TCCCGCCCGC TAG
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Protein sequence | MSGEAAEPAA PPRDARAGSP EATSPGERTA LPGDAATSLK GGRKGTDGAE GEGAPVPARR PRRHDPNRRD RIIDVTIDVI AEHGLAGTGH RSVAEAADVP LGSMTYHFAS LDELVELAFS RYVSVLADRF DARLAAAPES GDLAAIVTDV IMVDFLRARR DLVLAYELYL GAARNPALRE VTRTWMRRSR RALERLTDPA TARVLDALLE GLVLHNFLAT DPMTREEVHQ AVARVIGPAR
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