Gene Sros_7862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7862 
Symbol 
ID8671185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8671332 
End bp8672054 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003343267 
Protein GI271969071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0504045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGG AGGCTGCCGA GCCCGCGGCA CCGCCGCGGG ACGCGCGGGC GGGGAGCCCC 
GAGGCGACGT CCCCCGGGGA GAGGACGGCG CTCCCCGGGG ACGCGGCGAC GTCCCTCAAG
GGCGGGCGGA AGGGTACGGA TGGCGCGGAG GGGGAGGGGG CTCCGGTTCC CGCCCGGCGC
CCGCGCCGCC ATGATCCGAA CAGGCGTGAC CGCATCATCG ACGTCACCAT CGACGTGATC
GCCGAGCACG GGCTCGCCGG TACCGGCCAC CGCAGCGTGG CGGAGGCGGC CGACGTCCCC
CTCGGCTCGA TGACCTACCA CTTCGCGAGC CTGGACGAGC TCGTCGAACT GGCCTTCTCC
CGCTACGTGA GCGTCCTGGC CGACCGTTTC GACGCGCGCC TGGCCGCCGC CCCCGAGAGC
GGGGACCTTG CCGCGATCGT CACCGACGTG ATCATGGTCG ACTTCCTGCG GGCCCGCCGT
GACCTGGTGC TCGCCTACGA GCTCTACCTC GGCGCCGCCC GCAATCCCGC TCTGCGGGAG
GTGACGCGGA CCTGGATGCG CCGGAGCAGG CGTGCCCTGG AACGGCTCAC CGATCCGGCG
ACCGCCCGGG TCCTCGACGC CCTGCTGGAA GGACTCGTGC TGCACAATTT CCTCGCGACG
GACCCCATGA CGCGCGAGGA GGTCCACCAG GCGGTCGCCC GCGTCATCGG TCCCGCCCGC
TAG
 
Protein sequence
MSGEAAEPAA PPRDARAGSP EATSPGERTA LPGDAATSLK GGRKGTDGAE GEGAPVPARR 
PRRHDPNRRD RIIDVTIDVI AEHGLAGTGH RSVAEAADVP LGSMTYHFAS LDELVELAFS
RYVSVLADRF DARLAAAPES GDLAAIVTDV IMVDFLRARR DLVLAYELYL GAARNPALRE
VTRTWMRRSR RALERLTDPA TARVLDALLE GLVLHNFLAT DPMTREEVHQ AVARVIGPAR