Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7845 |
Symbol | |
ID | 8671168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 8652932 |
End bp | 8654515 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Amino acid transporter-like protein |
Protein accession | YP_003343251 |
Protein GI | 271969055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.162631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGT ATTCACCACC CACCCCCGGC AGTGAGACCA CCTCAGGCGT CGAGGAGTTC GGCTACAAGC AGGCGATGAA GCGCGGCACC GGCCGCTTCG CCTCGTTCGC CGTCGCGTTC GCCTTCGTCT CGATCGCCAC CGGCATCTTC ACCACCTACG GTTCGGTGCT GAACAGCTCC GGACCGGTCG GCATCTGGAC CTGGCCGATC GTGATTGTCG GGCAGCTGGC CGTCGCGTTC ATCTTCGGGT CCCTGGCCGC GCGCATCCCG GTGACCGGAT ACTCCTACCA GTGGATGTCC CGGCTGGCGA ACCCCGTGCT CGGGTGGATC ATCGGCTGGA TCTCGTTCAC GTTCCTGGCG ATCGTGGTCG TCGCGGTGGA CTACACCATC GCCTCCACCG TTCTGCCCGT TCTGCTGCAG TACGAGGGGA CGGCGCTGAA CGCGTGGGTG ATCACAGGCG TGGTCATCCT GTTCCAGGCC GTCCTGGTGG CGTTCTCCAC CAAGTGGACC GAGCGGGTCA ACAACTTCGC CGTGTCCGCG GAGCTCATCG GCATGGTCGC CCTCGTCCTG CTCCTCCTCG GCGTGGGGTT CGTCGCGAAG GAGGTCAACT TCGCGAACCT GTTCAGCACC GGCGCCGTCC CGGCCGACGG CTACCTCAGC TTCGGGACGC TCACCTCGGC GGGCCCGTGG ATGCTGGGCT TCCTGCTCGG CGCGTTCACG ATCGTCGGCT TCGAGTCGGC GGCCAACCTC GCGGAGGAGA CGAAGGACCC GGCCCGCGTC GTCCCCCGCG CCATGTGGCA GGCGGTTCTC GCCTCCGGCG TGCTCGGGTT CCTGTTCCTC GTCGCCGTCA CCCTGCTCGC CGGCGACCCG GTCGAGCTGG CGAAGTCGGC GACGCCGATC GCCGATGTGA TCACCCGGGT GCTGGGCCCC GTCGTGGGTA CGGCGCTGCT GGTGCTGGTG GTGATCGCGA TCTTCGCCTG CGGCATGGTG ATCCTCATGA CCGGGGTGCG CCTGGTGTGG GCGATGTCCC GCGACGAGCG GTTCCCCGGC TGGCAGGCCT GGCGGAAGAT CTCGCCGCGG TTCGGCACGC CTCTGAACGC CACCGTGTTC ATGCTCGTCA TCGGCGAGCT GATCCTGGCG ATCTTCTCCA CCCGGACCGA CGCCCTGTTC GGACTGTTCG CCGCCGCCAC CCTGCTGCCC GCGATCATCT ACACGGGGAC CGTCGTCATG TACGTGGTCA AGCGGAAGGC GCTGCCGCCG AGCAGGGGAT TCGACCTGGG CCGGTGGGAG ATCCCGGTGA TCGTCGTCGC GCTGGTCTGG CTGGTGTTCG AGCTGCTGCT CTTCCGTGAC GCCTCGTTCG TGGACCCGTG GACCTACGTG CTGATCATGC TTGTCCTGGG CGCCGCGTAC CTGGTGTACC TCCTGGTCAC CCGCGGCGGG GCCAGGGGGC TGGCGATGCC GGACATGCAC TCCATCGACG CGGAGCTGAA CGCCGACGCC GCCAAGGGCA CGGAAGCCGC CAGGGACGGC GCCACCGCAG GCGCGGGGGC CGTCGACGAC ACGGACGGGG CGCGCGGGCG GTGA
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Protein sequence | MSQYSPPTPG SETTSGVEEF GYKQAMKRGT GRFASFAVAF AFVSIATGIF TTYGSVLNSS GPVGIWTWPI VIVGQLAVAF IFGSLAARIP VTGYSYQWMS RLANPVLGWI IGWISFTFLA IVVVAVDYTI ASTVLPVLLQ YEGTALNAWV ITGVVILFQA VLVAFSTKWT ERVNNFAVSA ELIGMVALVL LLLGVGFVAK EVNFANLFST GAVPADGYLS FGTLTSAGPW MLGFLLGAFT IVGFESAANL AEETKDPARV VPRAMWQAVL ASGVLGFLFL VAVTLLAGDP VELAKSATPI ADVITRVLGP VVGTALLVLV VIAIFACGMV ILMTGVRLVW AMSRDERFPG WQAWRKISPR FGTPLNATVF MLVIGELILA IFSTRTDALF GLFAAATLLP AIIYTGTVVM YVVKRKALPP SRGFDLGRWE IPVIVVALVW LVFELLLFRD ASFVDPWTYV LIMLVLGAAY LVYLLVTRGG ARGLAMPDMH SIDAELNADA AKGTEAARDG ATAGAGAVDD TDGARGR
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