| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7157 |
|---|
| Symbol | |
|---|
| ID | 8670468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7905654 |
|---|
| End bp | 7906490 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC-type multidrug transport system permease component-like protein |
|---|
| Protein accession | YP_003342595 |
|---|
| Protein GI | 271968399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.024158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA AGTCACTCCG TATCGGCCTG CGCCGGGGCT GGAGGGAGCA CCTGCACCTG
GTCAAGGACC GCAAGGAGCT GCTCACCACC CTGATCGGCA CGGTCGGCGT CTTCGCCCTG
CTGCTGCTCT GGATCGGCGA CGGCCGGGTC GGGGAGACGG GCGTCTCCCA GGGCACGTTC
ATGACGGTCG GGTTCCTGGC CTTCACCGTC TTCTCCAACG GCCTGATGAC CCTCCCGATG
GCGATCGCCA CCGACCGCGA GGAGGGGACG CTGCTGCGGC TGCGGACCAT CCCCGGCGGC
ATCCCGGCCT ACCTCACCGG GCGGGCGGTG ACGGTCCTGT GCCAGATCGC CGTGCAGAGC
GTGCTGATCG TGGGCGCCGG CGTCGCCATG GGCGGGATCG CACCGCCCCG CGACTGGCTG
ACCCTGGCGT GGGTGCTGCT GCTGGGCACC GTCGCCGTGG TGCCGCTGGG GGCGGTCATC
GGCTGCCTGG TCCCCGGGCC GAAGGCCGCG GCGGGCCTGC TGGGACTGCC GATGATGGTC
CTGATGGTCA CCTCGGGGGT CATGGTCCCC GTCACGTTCA TGCCCGAGGT CGTCCAGTGG
ATCTCCCAGG CCTTCCCGCT CTACTGGCAG GGACTCGGCC TGCGGGCGGC GTTCATGCCC
GACGCCATGC TCGCCGCCGA GATCGGCGGG AGCTGGCGCC TGCCCTGGGT GGCCGGCGCG
CTCGCGACGT GGGCCGTCGC CGGTATGCTG CTGGCGCCGG GGCTGATCCG CCGCGTCACC
CGCCGCGAGT CCGGGTCCCG GCTCGCCGAG CGCCGGCTGG CGGCGCAGGC CTCCTGA
|
|---|
| Protein sequence | MNVKSLRIGL RRGWREHLHL VKDRKELLTT LIGTVGVFAL LLLWIGDGRV GETGVSQGTF
MTVGFLAFTV FSNGLMTLPM AIATDREEGT LLRLRTIPGG IPAYLTGRAV TVLCQIAVQS
VLIVGAGVAM GGIAPPRDWL TLAWVLLLGT VAVVPLGAVI GCLVPGPKAA AGLLGLPMMV
LMVTSGVMVP VTFMPEVVQW ISQAFPLYWQ GLGLRAAFMP DAMLAAEIGG SWRLPWVAGA
LATWAVAGML LAPGLIRRVT RRESGSRLAE RRLAAQAS
|
|---|
| |