Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6978 |
Symbol | |
ID | 8670288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7693846 |
End bp | 7694754 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain-like protein |
Protein accession | YP_003342422 |
Protein GI | 271968226 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.16745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCCA CGCTGCACGA GCACGCGCTG TTCGCCGGGC GCCCCGTCTT GGGCGGTGTC CATCAGCTGA ACCCCGGCAT CGAGCCGCAC GCGCACGACT TCCTCGAGAT CGCGGTGATC GGAAGCGGTT ACGGCCGGCA CGTGACCAGT CAGGGTGAGC ATCCGCTGCG GCGCGGGCAG GTCATCGTGC TTCGCCCCGG TGCCTGGCAC GGGTTCCTGG ACTGCGCCGA CCTGACCGTC GCCAACTGCT GCCTGTCCGC CCAGGCTCTG AGGACCGAGC TGGCGGCGCT GTACGACATC CCGATGCTGC GCCGGATGCT GTGGACCGAC CCGGTGGCAT CCGGCACGCA CGGTGTGGCG GTCACGACCG TCGATCCGGT GGCCGCCGAG GAGGCCATCG CGGAGATCGG CCTGCTCGAA CGGGACCTCG GAGCCGATCA GGGCCGGCCA GGCCGTGTGC TGGGCCGGCT GGTCACCGTA CTCGGTGTCC TGGCCGACGG GCGTGACCCC GAACGAGAGA CGCCCGAGTC CGCCATCCAC CCCGCTGTCG CCGCCACCAT CGCCCGGTTC GAGGCAGCGC CTGCCCATCC ATGGCGGCTG GATGATCTCG CCCGGGCGGT CAACCTGGAT CCCGCCTATC TCGGCCGGCT GTTCGGACGG CACGTCGGGT TGACGCCGCT GGGCTTCCTG GCCCGGCTGC GGGCCGAGCG CGCCGCCACG CTACTGGCAC ACTCGACCCT GCCGGCCGCC CGGGTCGGCG CCGCCGTCGG CTGGGACGAC CCGACATACT TCGCTCGCCG CTTCCGGACA CTGGTCGGAC TGACACCCAC CGAGTACCGG CGACGTAGCC GATCAACCGC CCATACGGAG TTCAGCGCCT CGGCCGAGTC GACGCGGAAG AGTTCCTGA
|
Protein sequence | MPATLHEHAL FAGRPVLGGV HQLNPGIEPH AHDFLEIAVI GSGYGRHVTS QGEHPLRRGQ VIVLRPGAWH GFLDCADLTV ANCCLSAQAL RTELAALYDI PMLRRMLWTD PVASGTHGVA VTTVDPVAAE EAIAEIGLLE RDLGADQGRP GRVLGRLVTV LGVLADGRDP ERETPESAIH PAVAATIARF EAAPAHPWRL DDLARAVNLD PAYLGRLFGR HVGLTPLGFL ARLRAERAAT LLAHSTLPAA RVGAAVGWDD PTYFARRFRT LVGLTPTEYR RRSRSTAHTE FSASAESTRK SS
|
| |