Gene Sros_6978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6978 
Symbol 
ID8670288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7693846 
End bp7694754 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID 
ProductTranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain-like protein 
Protein accessionYP_003342422 
Protein GI271968226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.16745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCA CGCTGCACGA GCACGCGCTG TTCGCCGGGC GCCCCGTCTT GGGCGGTGTC 
CATCAGCTGA ACCCCGGCAT CGAGCCGCAC GCGCACGACT TCCTCGAGAT CGCGGTGATC
GGAAGCGGTT ACGGCCGGCA CGTGACCAGT CAGGGTGAGC ATCCGCTGCG GCGCGGGCAG
GTCATCGTGC TTCGCCCCGG TGCCTGGCAC GGGTTCCTGG ACTGCGCCGA CCTGACCGTC
GCCAACTGCT GCCTGTCCGC CCAGGCTCTG AGGACCGAGC TGGCGGCGCT GTACGACATC
CCGATGCTGC GCCGGATGCT GTGGACCGAC CCGGTGGCAT CCGGCACGCA CGGTGTGGCG
GTCACGACCG TCGATCCGGT GGCCGCCGAG GAGGCCATCG CGGAGATCGG CCTGCTCGAA
CGGGACCTCG GAGCCGATCA GGGCCGGCCA GGCCGTGTGC TGGGCCGGCT GGTCACCGTA
CTCGGTGTCC TGGCCGACGG GCGTGACCCC GAACGAGAGA CGCCCGAGTC CGCCATCCAC
CCCGCTGTCG CCGCCACCAT CGCCCGGTTC GAGGCAGCGC CTGCCCATCC ATGGCGGCTG
GATGATCTCG CCCGGGCGGT CAACCTGGAT CCCGCCTATC TCGGCCGGCT GTTCGGACGG
CACGTCGGGT TGACGCCGCT GGGCTTCCTG GCCCGGCTGC GGGCCGAGCG CGCCGCCACG
CTACTGGCAC ACTCGACCCT GCCGGCCGCC CGGGTCGGCG CCGCCGTCGG CTGGGACGAC
CCGACATACT TCGCTCGCCG CTTCCGGACA CTGGTCGGAC TGACACCCAC CGAGTACCGG
CGACGTAGCC GATCAACCGC CCATACGGAG TTCAGCGCCT CGGCCGAGTC GACGCGGAAG
AGTTCCTGA
 
Protein sequence
MPATLHEHAL FAGRPVLGGV HQLNPGIEPH AHDFLEIAVI GSGYGRHVTS QGEHPLRRGQ 
VIVLRPGAWH GFLDCADLTV ANCCLSAQAL RTELAALYDI PMLRRMLWTD PVASGTHGVA
VTTVDPVAAE EAIAEIGLLE RDLGADQGRP GRVLGRLVTV LGVLADGRDP ERETPESAIH
PAVAATIARF EAAPAHPWRL DDLARAVNLD PAYLGRLFGR HVGLTPLGFL ARLRAERAAT
LLAHSTLPAA RVGAAVGWDD PTYFARRFRT LVGLTPTEYR RRSRSTAHTE FSASAESTRK
SS