Gene Sros_6955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6955 
Symbol 
ID8670265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7665496 
End bp7666788 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342399 
Protein GI271968203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.123489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.422141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGTT GTCTCCTGGG GATGGCGGGG TGCGCGTTGG GAAGGTCGCT GGGTCGGCAG 
TTCAGGTGGT TCTGGGCCGC GTATGCGGTC AGCGCGTTCG GCACATGGCT CGCGTTCGAC
ACGTTCGCCC TGATCGCGAT TCTCGCTCTG GACGCAGGGC CTACCGAGGT GTCGGTTCTG
GCCGCCGCGG GGCTCGCGGT CGGGGCACTG GTCGCGGTGC CGCTCGGGCC GTGGGTGGAG
TTCCGGCGCA AACGGCCGGT GATGATCGCG ATGGACCTGA TCCGGTTCGC GGCGCTGTTG
AGCGTTCCCG CCGCCTACGT GCTCGGCCGG CTGAGCTTCG CTCAGCTCCT GGTCGTGGCG
GTCGTCGTCG GCGCGGCCGA CATCGCCTTC ACCGCTGCGA GCGGAGCATG TCTGAAGGCA
CTCGTCCGGT CCGAGGACCT GCTCGTCGCG AACGGGCGGT TCGAGGCCAC GACCTGGACC
GCCACCGCGC TCGGGCCGCC GCTCGGTACC GCCGCGATCG GGCTGGTGGG CCCGGTGACG
AGCGTGGCGG CCAACGCGGT CAGCTTCCTC CTCTCGGCCG CGGGGATCCG TGCCATCGGC
GGGCGGGAGC CACGTCCCGC GCGAGCCGCC GCACCGCCCC GGCCTGGAGC CGGCGACCTG
CTGGAGGGAT GGCGGTACAT CCTCGCCAGC CCGGCGCTGC GCCCGTTGTT CTTCAACACT
GTCCTGGTCA GCGGCCTGAT CATGGCAACC TCGCCGTTGC TCGCCGTCCT CATGCTCGGC
GAGCTCGGGT TCGCGCCCTG GCAGTACGGC CTCGCCTTCG GCGTCCCCTG CGTCGGCGGC
CTCATCGGCT CGCGGATGGC CCGCCCGCTC ATCGCACGGT TCGGGCGGCA CAAGGTCATG
CTCACCGCCG GGACGCTGCG CGCGTGCTGG TCACTCGGAC TGGCCTTCAT CAGTCCCGGC
CCCGCCGGGC TCTTCCTCGT CATCGCCGTC GAATTCGGGC TGATCACCTG TATGGGCGTG
TTCAACCCGG TATTCGCTAC CTACCGGCTC GAACAGTTCC CGTCGGACCG GGTCGCCCGC
ACGCTGGCCG CCTGGTCGAT CACCAATAAA GCCACCGTCG CGGCCATGAC CGGCGGGTGG
GGCCTGCTGG CCGGTCTCAC CAGCCCCCGC ACCGCGATCG CGATCGCCGG TCTTCTCCTT
CTGGCGACCT CGCTCCTCCT ACCCCGACAC GACCGCACGC CCCTACTCAA GAACGCCGAC
CAGGCGCCAC CGGAAAGGCA GACACTCGCA TGA
 
Protein sequence
MDGCLLGMAG CALGRSLGRQ FRWFWAAYAV SAFGTWLAFD TFALIAILAL DAGPTEVSVL 
AAAGLAVGAL VAVPLGPWVE FRRKRPVMIA MDLIRFAALL SVPAAYVLGR LSFAQLLVVA
VVVGAADIAF TAASGACLKA LVRSEDLLVA NGRFEATTWT ATALGPPLGT AAIGLVGPVT
SVAANAVSFL LSAAGIRAIG GREPRPARAA APPRPGAGDL LEGWRYILAS PALRPLFFNT
VLVSGLIMAT SPLLAVLMLG ELGFAPWQYG LAFGVPCVGG LIGSRMARPL IARFGRHKVM
LTAGTLRACW SLGLAFISPG PAGLFLVIAV EFGLITCMGV FNPVFATYRL EQFPSDRVAR
TLAAWSITNK ATVAAMTGGW GLLAGLTSPR TAIAIAGLLL LATSLLLPRH DRTPLLKNAD
QAPPERQTLA