Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6955 |
Symbol | |
ID | 8670265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 7665496 |
End bp | 7666788 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003342399 |
Protein GI | 271968203 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.123489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.422141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGGTT GTCTCCTGGG GATGGCGGGG TGCGCGTTGG GAAGGTCGCT GGGTCGGCAG TTCAGGTGGT TCTGGGCCGC GTATGCGGTC AGCGCGTTCG GCACATGGCT CGCGTTCGAC ACGTTCGCCC TGATCGCGAT TCTCGCTCTG GACGCAGGGC CTACCGAGGT GTCGGTTCTG GCCGCCGCGG GGCTCGCGGT CGGGGCACTG GTCGCGGTGC CGCTCGGGCC GTGGGTGGAG TTCCGGCGCA AACGGCCGGT GATGATCGCG ATGGACCTGA TCCGGTTCGC GGCGCTGTTG AGCGTTCCCG CCGCCTACGT GCTCGGCCGG CTGAGCTTCG CTCAGCTCCT GGTCGTGGCG GTCGTCGTCG GCGCGGCCGA CATCGCCTTC ACCGCTGCGA GCGGAGCATG TCTGAAGGCA CTCGTCCGGT CCGAGGACCT GCTCGTCGCG AACGGGCGGT TCGAGGCCAC GACCTGGACC GCCACCGCGC TCGGGCCGCC GCTCGGTACC GCCGCGATCG GGCTGGTGGG CCCGGTGACG AGCGTGGCGG CCAACGCGGT CAGCTTCCTC CTCTCGGCCG CGGGGATCCG TGCCATCGGC GGGCGGGAGC CACGTCCCGC GCGAGCCGCC GCACCGCCCC GGCCTGGAGC CGGCGACCTG CTGGAGGGAT GGCGGTACAT CCTCGCCAGC CCGGCGCTGC GCCCGTTGTT CTTCAACACT GTCCTGGTCA GCGGCCTGAT CATGGCAACC TCGCCGTTGC TCGCCGTCCT CATGCTCGGC GAGCTCGGGT TCGCGCCCTG GCAGTACGGC CTCGCCTTCG GCGTCCCCTG CGTCGGCGGC CTCATCGGCT CGCGGATGGC CCGCCCGCTC ATCGCACGGT TCGGGCGGCA CAAGGTCATG CTCACCGCCG GGACGCTGCG CGCGTGCTGG TCACTCGGAC TGGCCTTCAT CAGTCCCGGC CCCGCCGGGC TCTTCCTCGT CATCGCCGTC GAATTCGGGC TGATCACCTG TATGGGCGTG TTCAACCCGG TATTCGCTAC CTACCGGCTC GAACAGTTCC CGTCGGACCG GGTCGCCCGC ACGCTGGCCG CCTGGTCGAT CACCAATAAA GCCACCGTCG CGGCCATGAC CGGCGGGTGG GGCCTGCTGG CCGGTCTCAC CAGCCCCCGC ACCGCGATCG CGATCGCCGG TCTTCTCCTT CTGGCGACCT CGCTCCTCCT ACCCCGACAC GACCGCACGC CCCTACTCAA GAACGCCGAC CAGGCGCCAC CGGAAAGGCA GACACTCGCA TGA
|
Protein sequence | MDGCLLGMAG CALGRSLGRQ FRWFWAAYAV SAFGTWLAFD TFALIAILAL DAGPTEVSVL AAAGLAVGAL VAVPLGPWVE FRRKRPVMIA MDLIRFAALL SVPAAYVLGR LSFAQLLVVA VVVGAADIAF TAASGACLKA LVRSEDLLVA NGRFEATTWT ATALGPPLGT AAIGLVGPVT SVAANAVSFL LSAAGIRAIG GREPRPARAA APPRPGAGDL LEGWRYILAS PALRPLFFNT VLVSGLIMAT SPLLAVLMLG ELGFAPWQYG LAFGVPCVGG LIGSRMARPL IARFGRHKVM LTAGTLRACW SLGLAFISPG PAGLFLVIAV EFGLITCMGV FNPVFATYRL EQFPSDRVAR TLAAWSITNK ATVAAMTGGW GLLAGLTSPR TAIAIAGLLL LATSLLLPRH DRTPLLKNAD QAPPERQTLA
|
| |