| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6863 |
|---|
| Symbol | |
|---|
| ID | 8670173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7558968 |
|---|
| End bp | 7559624 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | efflux protein |
|---|
| Protein accession | YP_003342312 |
|---|
| Protein GI | 271968116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.286077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCA GCTCCTCTCT GCCCGCCTTC GTCCTCGCCG TGGTGCTGAT CTCCGCCTCG
CCGGGCCCGG CGATGGCGCT GATCCTGCGC CGCGCGGCCC TGCGCGGCTT CTCCGGCGCG
GTGCCCACGG TGCTGGGCCT GGAGGCCGGC CTGTACCTGT GGGCGTTGCT CGCCGCCGCC
GGGCTCGCCG CCCTGGTCGC CGCCTCGGAG GTAGCCTTCC TCGTCCTGCG CGTGGTGGGC
GCGGCCTTCC TGCTGTACCT CGGGATCAAG ACCTGGCGCT CGGCGTGGCG CAGCCGCGGA
ACGGGCGGAG CGGCCGAGGA GGTCGCTGCC GGGGAACCGG AGCGCGGCTC GGCGCTGACC
TGGTGGAGGG CGTTCGGCGA GGGATCGGTG GTGATGCTGG CCAACCCGAA GGCCGCCGCC
TTCATGATCG CGTTCTATCC GCAGTTCGTA CCGGTCGACC GGCCGCTGTT CGCCACGACC
GCGCTGCTCG CCGTGCTCCA GGTGGCCATC GAGACCGTCC TGTATCTGGC GCTGGCGGCC
GCGGTCGGGC GGGCCGGGGC GTGGTTCCGC CGCCCGGTGA TCCGGCGTCG GCTGGACGCG
GTCAGCGGCA CGGTCCTCGT CGCCCTGGGC CTGCGCATGG CTGCCGAGAG CCGCTGA
|
|---|
| Protein sequence | MDLSSSLPAF VLAVVLISAS PGPAMALILR RAALRGFSGA VPTVLGLEAG LYLWALLAAA
GLAALVAASE VAFLVLRVVG AAFLLYLGIK TWRSAWRSRG TGGAAEEVAA GEPERGSALT
WWRAFGEGSV VMLANPKAAA FMIAFYPQFV PVDRPLFATT ALLAVLQVAI ETVLYLALAA
AVGRAGAWFR RPVIRRRLDA VSGTVLVALG LRMAAESR
|
|---|
| |