| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6800 |
|---|
| Symbol | |
|---|
| ID | 8670109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7490586 |
|---|
| End bp | 7491209 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003342252 |
|---|
| Protein GI | 271968056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.813677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACG GGAGAAAACT GCGCGGCCAG CGCAGCCGCG AAGCGATCCT CGACCAAGCC
GTCGCCCTGG CCTCCGTCGA CGGCCTCGGC GGCCTCACCC TGAGCCGCCT GGCCGAGGCC
GCCGGCGTCA GCAAGTCCGG GTTCTTCGCC CACTGGCGCG ACAAGGAGCA GCTCCAGCTC
GACTGCGTCG ACCGGGCCCG CCGCCTCTGG AGCGAGCGGG TGATCGCCCC TGCCGCCACC
GCCCCCAGAG GCCTCAGGCG GCTGTTCGCC CTCCATGAGT CCCGCCTCGC CTTCTACGCG
GACGGCGTGC TCCCCGGCGG CTGCTTCTTC TTCGTCGCCC AGGTCGAGTT CGACGACCGT
CCCGGCCCGG TCAGGGACAG CGTCGCCGCC GCCATGGGCG ACTGGCTCGG CTACCTCGAA
CACCGGGTCC AGGAGGCCGT CGACCTCGGC GAGCTGACCG CCGATCCGGC CCAGCTCGCC
TACGAGATCG AGGCGCTGGG CGAGGCCGCC GTCACCCACG CCCGGCTGCG CGACAGCGAC
GCCGCCTACC GCCACGCCCG CAGAGCGGTC CTCGACCGGC TCCGCGTCCT CGCCACCGAC
CCTTCGATCC TCCCGGAGGA CTGA
|
|---|
| Protein sequence | MQDGRKLRGQ RSREAILDQA VALASVDGLG GLTLSRLAEA AGVSKSGFFA HWRDKEQLQL
DCVDRARRLW SERVIAPAAT APRGLRRLFA LHESRLAFYA DGVLPGGCFF FVAQVEFDDR
PGPVRDSVAA AMGDWLGYLE HRVQEAVDLG ELTADPAQLA YEIEALGEAA VTHARLRDSD
AAYRHARRAV LDRLRVLATD PSILPED
|
|---|
| |